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View Structure Prediction Details

Protein: ST6Gal-PB
Organism: Drosophila melanogaster
Length: 474 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ST6Gal-PB.

Description E-value Query
Range
Subject
Range
gi|114425680 - gi|114425680|emb|CAL44598.1| beta-galactosidase alpha-2,6 sialyltransferase [Drosophila sechellia]
491.0 [0..1] [474..1]

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Predicted Domain #1
Region A:
Residues: [1-80]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRQVTRASSG QSQALLSCLI IAVCAALIIQ SGHIQGVKAQ PGREPGEVNS RQPGNGAYEN  60
   61 STGTERRLRK VIWKCIPTGN 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [81-218]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GTTGHRVPRS VFHVRWNPNE KFIVESRENP AINSSKLAPH PRLKVSKNTK LTLSPKLYLC  60
   61 HDKHSELCHN KTQQFRQRIV RAFEKAMVES VNESQANHYN VDYKPVFGDS FEEQYYPSTC 120
  121 LVMEAGVRVL RRKDAPFN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [219-474]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KLPFGRLFPR QKLFRNVKDI KTCAIVSSAG SLAGSKLGRF IDTHDIVMRF NHAPTQGHEV  60
   61 DVGSKTTIRV VNSQVVTKPE FDFTRAPIFR NVTIAAWDPG KYNGTLEDWL TSADYDLFSN 120
  121 YELYRRRYPK SRAFLIDPHS VWRLWQSLQM FAGNRPISKN PPSSGFIGLA LLLPHCPQVD 180
  181 FVEYVPSTRL NGRCHYYSKE MNSACTFGSW HPLAAEKLMA LDMNMAEDDD MSVFQFGILR 240
  241 IRRPDKLLCG FNFFGY

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.06
Match: 2drjA
Description: No description for 2drjA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle