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View Structure Prediction Details

Protein: FBpp0310097, Fcp1-PA
Organism: Drosophila melanogaster
Length: 880 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0310097, Fcp1-PA.

Description E-value Query
Range
Subject
Range
gi|21483550 - gi|21483550|gb|AAM52750.1| SD01014p [Drosophila melanogaster]
591.0 [0..1] [880..20]

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Predicted Domain #1
Region A:
Residues: [1-171]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQNIPDEEGA TPSRAPGGVA ASGAAEGDDG GGGSGAKNSA SGNSNNNTSG GGIIVLRAAL  60
   61 GENEARAVIN KWRVREGQFV SAAQILFLYQ PVGVDAKDAK DAGKPGGDCA IQRYKSQRAG 120
  121 VVKKRLRKEG ELLTKGDAIL ELSECIHTTV IKDMCADCGA DLRQNENGQT S

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.09691
Match: 2d5dA
Description: No description for 2d5dA was found.

Predicted Domain #2
Region A:
Residues: [172-372]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EASVPMVHTM PDLKVTQKLA QKLGHDDTRR LLADRKLVLL VDLDQTVIHT TNDTVPDNIK  60
   61 GIYHFQLYGP HSPWYHTRLR PGTAEFLERM SQLYELHICT FGARNYAHMI AQLLDPEGKF 120
  121 FSHRILSRDE CFNATSKTDN LKALFPNGDS MVCIIDDRED VWNMASNLIQ VKPYHFFQHT 180
  181 GDINAPPGLS KHELDGEGVD F

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 56.221849
Match: 2hhlA
Description: No description for 2hhlA was found.

Predicted Domain #3
Region A:
Residues: [373-538]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KEITEKHGDK DKTESSSEVK PEDTDKGDNT VTSTSKDDDV NEESVDVFEI EGDAKDPEVS  60
   61 NASSATEAPK EPRDKLNGKT NAEDIVVIDD SSSGSPDAEK AASDGEDVVV IDDNSKESTK 120
  121 AEVPPTPAEK NEVVASSTTS PDEKRPSADA DVATTSKTPS LRAPLE

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.06
Match: 2j63A
Description: No description for 2j63A was found.

Predicted Domain #4
Region A:
Residues: [539-880]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GQKQIEIEDP DDYLLYLEVI LRNIHKRFYS IYDETTEIPD LKVIVPKIRS EVLRGKNLVF  60
   61 SGLVPTQMKL EQSRAYFIAK SLGAEVKPNI DKEITHLVAV NAGTYKVNAA KKEPAIKVVN 120
  121 ANWLWTCAER WEHVEEKLFP LDRKVRNKGR QPPAHCHSPE HVVNYSERSE ISPSSSKQQE 180
  181 EQSGNFRETL NPLLVFTNAD IESMNKDYET FFESDSSSDE GPVNFENPPM DKKLLKRKRE 240
  241 DDNSNRAHDF FTRSDDIMIG APNLVEVDIS SNEEADDNNE KEDDDDEMPS AKFRRGEDLP 300
  301 SDLELGSESN SEKEPEDEDD GEWNMMGAAL EREFLGLEDF DM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.522879
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle