| Protein: | mAcR-60C-PA |
| Organism: | Drosophila melanogaster |
| Length: | 788 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mAcR-60C-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
419.0 | [0..1] | [788..1] |
|
Region A: Residues: [1-393] |
1 11 21 31 41 51
| | | | | |
1 MEPVMSLALA AHGPPSILEP LFKTVTTSTT TTTTTTTSTT TTTASPAGYS PGYPGTTLLT 60
61 ALFENLTSTA ASGLYDPYSG MYGNQTNGTI GFETKGPRYS LASMVVMGFV AAILSTVTVA 120
121 GNVMVMISFK IDKQLQTISN YFLFSLAIAD FAIGAISMPL FAVTTILGYW PLGPIVCDTW 180
181 LALDYLASNA SVLNLLIISF DRYFSVTRPL TYRAKRTTNR AAVMIGAAWG ISLLLWPPWI 240
241 YSWPYIEGKR TVPKDECYIQ FIETNQYITF GTALAAFYFP VTIMCFLYWR IWRETKKRQK 300
301 DLPNLQAGKK DSSKRSNSSD ENTVVNHASG GLLAFAQVGG NDHDTWRRPR SESSPDAESV 360
361 YMTNMVIDSG YHGMHSRKSS IKSTNTIKKS YTC
|
| Detection Method: |  |
| Confidence: | 55.39794 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [394-788] |
1 11 21 31 41 51
| | | | | |
1 FGSIKEWCIA WWHSGREDSD DFAYEQEEPS DLGCTSMNVM RDNYSMGGSV SGVRPPSILL 60
61 SDVSPTPLPR PPLASISQLQ EMSAVTASTT ANVNTSGNGN GAINNNNNAS HNGNGAVNGN 120
121 GAGNGSGIGL GTTGNATHRD SRTLPVINRI NSRSVSQDSV YTILIRLPSD GASSNAANGG 180
181 GGGPGAGAAA SASLSMQGDC APSIKMIHED GPTTTAAAAP LASAAATRRP LPSRDSEFSL 240
241 PLGRRMSHAQ HDARLLNAKV IPKQLGKAGG GAAGGGVGGA HALMNARNAA KKKKKSQEKR 300
301 QESKAAKTLS AILLSFIITW TPYNILVLIK PLTTCSDCIP TELWDFFYAL CYINSTINPM 360
361 CYALCNATFR RTYVRILTCK WHTRNREGMV RGVYN
|
| Detection Method: | |
| Confidence: | 4.1 |
| Match: | 1f88A |
| Description: | Rhodopsin |
| Matching Structure (courtesy of the PDB): |
|
