| Protein: | FBpp0309973, bs-PA |
| Organism: | Drosophila melanogaster |
| Length: | 449 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0309973, bs-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
321.0 | [0..1] | [449..1] |
|
Region A: Residues: [1-164] |
1 11 21 31 41 51
| | | | | |
1 MDPTRGDSRY NLNYSMSSIG LSLADPADMY GNPALGAGRP PSGGLLQNMG GVPPMQRPNP 60
61 AAGAPPAPQC QTLHSPQHAS QQQQQQQQQQ QQHQQQQQQQ QQHPQQQRGL KRSGSDCYED 120
121 HHRSSGGLTL QGLDNVASGA VDDSVDNYNP LPNKKSPPAN GKKT
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [165-254] |
1 11 21 31 41 51
| | | | | |
1 KGRVKIKMEY IDNKLRRYTT FSKRKTGIMK KAYELSTLTG TQVMLLVASE TGHVYTFATR 60
61 KLQPMITSEA GKQLIQTCLN SPDPPSVGGG
|
| Detection Method: | |
| Confidence: | 22.09691 |
| Match: | 1k6oB |
| Description: | Serum response factor (SRF) core |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| nucleic acid binding | 1.64703315173763 | bayes_pls_golite062009 |
|
Region A: Residues: [255-449] |
1 11 21 31 41 51
| | | | | |
1 DQRMSATGFE ETELSYNIAD EDSKDDRSPT SSGNESDDSS DVEMPAEAAE VATKLPASKT 60
61 EVSAPPAASC SAATASSGHK TMPALNYQTD TNSGPSTSTA AGGGGSADSK YVYSAASIAN 120
121 IPQKMLRQLI QSGHLQVHAE EDGNQYVTIP LSSTAANLIK SNKLTASGSG ASGSGTPVKN 180
181 DASADKPLTI KQEFD
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
