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View Structure Prediction Details

Protein: FBpp0310077, Zfr...
Organism: Drosophila melanogaster
Length: 347 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0310077, Zfr....

Description E-value Query
Range
Subject
Range
gi|21064263 - gi|21064263|gb|AAM29361.1| GM13546p [Drosophila melanogaster]
358.0 [0..1] [347..1]

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Predicted Domain #1
Region A:
Residues: [1-110]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEIDLGFAEK SDNGAWLSNR YFPSKLGGQP AWLELEALPP TSQLQCSKCR APKSFLAQLY  60
   61 APFEDEYNFH RSIYVFLCRN SDCQEAQNAS NFTVLRSQLP RKNKFFSEEE 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.06
Match: 1pv5A
Description: Structure of Hypothetical Protein Ywqg from Bacillus subtilis
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [111-187]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PSDVGQPLPA VPCLKKLCAA CGCHAPHACS KCKAIHYCSP EHQRAHWPQH KPNCGAPEVA  60
   61 TEKPLTQIVF PEFEIVM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 7.39794
Match: 2oddA
Description: No description for 2oddA was found.

Predicted Domain #3
Region A:
Residues: [188-347]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DSNPVESGEE DKDDEARLAE FQELESSGKT GDLSNVSEAE MDKYFGNSAA ADDKTFRQFK  60
   61 KQTAAEPDQI VRYKRGGQPL WITNTVKTVE DQLNKLPNCI ACGGERQFEF QIMPQALTLL 120
  121 EDENLDWGVL AVYTCAKSCP IDGYVEELLI KQDIVAEDQS 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 146.638272
Match: PF04194.4
Description: No description for PF04194.4 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle