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View Structure Prediction Details

Protein: CG3209-PB
Organism: Drosophila melanogaster
Length: 458 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG3209-PB.

Description E-value Query
Range
Subject
Range
gi|50806268 - gi|50806268|ref|XP_424400.1| PREDICTED: hypothetical protein [Gallus gallus]
372.0 [0..1] [456..10]

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Predicted Domain #1
Region A:
Residues: [1-115]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIAVLLDIFW IPIGGFLSFL IFISAINKSI GVRKAYVNLL LRIFEYGRVS IETASKENQH  60
   61 IQNPKTDDKQ GVQLVDDADS KEGTNGATLI TRDAVLLPQP QEPAPEKPVS STKDE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [116-458]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 INFDFEKCLD YVKSGVEAII EDDVTSRFEA EELKSWNMLT RTNRHYEFIS WKITSIWVFG  60
   61 FFIRYVILMP LRVLVCFVGV VWLTVCTAAV GYLKDGPFKR DLVHKVLGMC FGVLSSAISA 120
  121 VITYHNEDNR PSSGICVANH TSPIDVLVLM CDSTYSLIGQ RHGGFLGVLQ RALARASPHI 180
  181 WFERGEAKDR HLVAERLKQH VSDPNNPPIL IFPEGTCINN TSVMQFKKGS FEVGGVIYPV 240
  241 AIKYDPRFGD AFWNSAKYSM MQYLYMMMTS WAIVCDVWYL PPMYRQEGES AIDFANRVKS 300
  301 VIAKQGGLID LVWDGQLKRM KPKKEWREIQ QVEFANRLKS DST

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 3.4
Match: 1k30A
Description: Glycerol-3-phosphate (1)-acyltransferase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle