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View Structure Prediction Details

Protein: CG3121-PA
Organism: Drosophila melanogaster
Length: 708 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG3121-PA.

Description E-value Query
Range
Subject
Range
gi|54636048, gi|... - gi|54636048|gb|EAL25451.1| GA16095-PA [Drosophila pseudoobscura], gi|125808791|ref|XP_001360876.1| G...
716.0 [0..1] [690..1]

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Predicted Domain #1
Region A:
Residues: [1-243]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRDSCQNFS LDSTSSSHFA PPPVCAPRRK KPEKPAAEEA SPECSNVTSS SSSSTTTISI  60
   61 GAFDSQCNLH NARNPEAPNI GYELNVAKSI LQKYSTLSGD NLFDHLSDII KRVIDERPPN 120
  121 VIDFFEEFSR NVREQKFHLP ERFPPSGVFD EVRSFRVAKK ILQSMKLPYV VEGEDLMGED 180
  181 LSVEDLRTNE DMRIVIDDSM RYFVTFNERV QQLQFYWTQC GFSISNDDIF QLASAMNRLQ 240
  241 THP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [244-520]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SIMQCRFWGC INGLKASYYI VEASLTREEI ASRLVMMEEE MRQKQIPFPM RKDREDKPPP  60
   61 AHIGPELTPG IYGWEEFPPE ELEKMKPKAA PVPLVEEMEL YDIPPEFIGK GCNRYSYFVV 120
  121 NSLFDDWIEL PIVTPRQIVV SRQIKKFLTG DLEADVISYP CFPGKEKHYL RTLIGRITAG 180
  181 TYIAPVGYYR RMTKKEQRMF DGEEEEEGEE EEEEEEEEEF NEGEEEQIED NDVMLLKNEK 240
  241 YEAEPLGSLA TPVAWVHVRS NILNQQGRVV WYDEEKA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [521-708]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RKEREKALAL YLKMQMLGEM EEEVEEEEDE EEGEEEGEEE GMIEGFNQPE LGPSILSSCA  60
   61 NDMNPEVPVS WLARMTSKYT NQKERMLVMQ SNVWPGAYTF IFEKTCESIY LGWGHKYYAR 120
  121 NIPFKHLPMV QEEFPHNPED FVEANDPTVE EEEAYKAWLL RKQQKAEYVA EDIEDYDDDE 180
  181 FADQYDDD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle