YRC Public Data Repository - Protein Structure Prediction

Protein:	FBpp0309940, FBp...
Organism:	Drosophila melanogaster
Length:	392 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0309940, FBp....

Description	E-value	Query Range	Subject Range
gi\|157103815, gi... - gi\|157118019\|ref\|XP_001658968.1\| hypothetical protein AaeL_AAEL008139 [Aedes aegypti], gi\|157103815\|...	690.0	[0..1]	[392..1]

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Predicted Domain #1

Region A:
Residues: [1-200]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIGPSSQISK ILLTLLFLLI IFYVFMDVEL YLRIHNYAIE RNYHTNVSLP ASVVGPSTSE  60
   61 SGSGSIGGSS SSSSSSSSST STKLPTAGDR QPSYEDHTWI SCDINPLCHV TVKAILLDHT 120
  121 NHYLFAPLAT MFDNVIGFSR STFITPNMIS FFHVGVACLA GKLVASDSLG YRRLGVLLFQ 180
  181 IRTFLDDLDG HVARVRKHIR

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [201-392]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GERSEIGTSG YYVDGLCDGL GCIALLLGIF FYLKNNPPRR GYSIIPMSDS KLPEPTMMIP  60
   61 KMKATTRKVA KNVISFTGQL LLSSTAWNRY IAVYQNMLER EDVSGNQSHC QDYVFKSTWF 120
  121 FCVAWMWRIV NVHALLHCVL LSIFCDKLWD FLRAIRYSGY IILLVAICLT EMHILEAQNY 180
  181 IFNSTACSNI SL