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View Structure Prediction Details

Protein: CG5554-PA
Organism: Drosophila melanogaster
Length: 323 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG5554-PA.

Description E-value Query
Range
Subject
Range
gi|22760543 - gi|22760543|dbj|BAC11237.1| unnamed protein product [Homo sapiens]
204.0 [0..27] [323..28]

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Predicted Domain #1
Region A:
Residues: [1-152]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHSTSYFVAA TCAALLLLAA TAQSTAAAQS GLQPGGKLIE LDEDNWHLML QGEWMIEFFA  60
   61 PWCPACKNLA PTWERFARVA KDVQVQVAKI DVTTSPSLSG RFFVTALPTI YHVKDGEFRQ 120
  121 YRGARDGDAL LYFVKKQQWQ SIEPLSAWKK PD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 31.69897
Match: 1x5eA
Description: The solution structure of the thioredoxin-like domain of human Thioredoxin-related transmembrane protein
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [153-323]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TTHMSVLSYF FKLSHTLKDF NGRLQEEYGL PTWGSYALFA IATIFVGAAL GLLLVCLVDF  60
   61 VYPPKKSQRQ SFSESQDNLT EGLEDLATEE IEDDGDAEEN DDEQRDSDEE EQEDDDEEEE 120
  121 DSEEQVGDLA TKEKEADSEP EKEEKPEPKQ AGDAAPEKTE QVRKRKPRKG D

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 6.522879
Match: 1bjxA
Description: HUMAN PROTEIN DISULFIDE ISOMERASE, NMR, 24 STRUCTURES
Matching Structure (courtesy of the PDB):

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