| Protein: | gi|24762405, gi|... |
| Organism: | Drosophila melanogaster |
| Length: | 1201 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24762405, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
841.0 | [0..1] | [729..1] |
|
Region A: Residues: [1-638] |
1 11 21 31 41 51
| | | | | |
1 MGQSSKSGSA GVGGVGGGGG VVCPSTAISG CASGTALIQL DATGPGAGGA GESEHERGTW 60
61 TGRFDFLLSL LGYSVGLGNV WRFPYLCYNN GGGAFLIPFT IMLVIAGLPL MFMELSFGQY 120
121 AALGPVAVYR RFCPLFRGLG TGMILVSAIV MLYYNLIIAW TIFYMFASFA PVLPWQNCEP 180
181 AWSTKYCFSY AQADQCEATN GTYYLRTCHN ATSAAENNIT TLALGALKRP PAEEYFNNFV 240
241 LGLSKGIEET GSIKLSLAAC LFLAWTIVFL CLCKGVQSSG KVVYFTALFP YVVLVILFVR 300
301 GVTLPGASTG ILFYLTPDWK QLANAQVWGD AAVQIFFALS PAWGGLITLS SYNKFSNNCY 360
361 NCGTFELSTK SNSRDSLIVA FCNIATSFFA GLVIFSIIGF LAHELNVDVE KVVDQGAGLA 420
421 FIVYPEVVTR LPVSPVWAVL FFVMLLTLGL DSQFALMETV TTAILDRFPN LRQYKIWVVL 480
481 SVAIFGYIGG LGFTTNSGMY WLQLMDKYAA NWSVLLIAIS ECILIAWIYG SQRFLNDIQG 540
541 MIGKRSWFWN FFWGIMWRYI TPATLLFILF FNWVEYKPAK YGHYVYPMWA DAVGWIVGLL 600
601 PVLVIFLVAF QEIWRAPMSL SFRDRIKHLL QPTAEWGP
|
| Detection Method: |  |
| Confidence: | 74.69897 |
| Match: | 2a65A |
| Description: | Crystal structure of LEUTAA, a bacterial homolog of Na+/Cl--dependent neurotransmitter transporters |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [639-700] |
1 11 21 31 41 51
| | | | | |
1 AGRPCVNLHA ERYQSQNYDG VTNTKILIEE EASPKQAANK KDRQLTLDVD VDVECLPLAT 60
61 VG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [701-914] |
1 11 21 31 41 51
| | | | | |
1 KRPGAPKSMG KQGSSGNLQT NAKNGTHKSP TTEISPSKQP LIPSEKDNKS ANIKVLAAGT 60
61 QSSGRECTTM STFAGGGEKK STKVNLATGA TSAAAPLASS NIATAATVAA ATKSPPAAGV 120
121 APTTLVGIAA TGTTVAAAAN GKATLKTTIS SGAVAATAAG GNKAASVAAA TATVAAGKTP 180
181 AAAMALNVAA SVKVSQTDKT APLKTTISAS VATA
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [915-1201] |
1 11 21 31 41 51
| | | | | |
1 PGGTKASTAP SVATAAVVSV SSGATVPAAA SKAAAPLKAT APPPSLAAVN ATQAAKSTPV 60
61 AAASALVASA PPAKSTSASV AKTNTNAGSK PTATLSTCKS DAPAAAASVG VTNGKVTPSG 120
121 GATSTAQPAV NQKATAAAAA QKSQGATATA TPTKTALNQK TIVPSAGSGK GDVPSSRSTD 180
181 TPPPAKGAAS SNISAKSTKA GKTQANETSP TKSAVKPIKA GSTSPTKAVV SKPGASAAKT 240
241 AAASAATATA TAAGSSSSNK KAATSTAATL GSQAKTKGNA SGAGTKK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
