| Protein: | Ssrp-PA |
| Organism: | Drosophila melanogaster |
| Length: | 723 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Ssrp-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
659.0 | [0..1] | [628..1] |
|
Region A: Residues: [1-123] |
1 11 21 31 41 51
| | | | | |
1 MTDSLEYNDI NAEVRGVLCS GRLKMTEQNI IFKNTKTGKV EQISAEDIDL INSQKFVGTW 60
61 GLRVFTKGGV LHRFTGFRDS EHEKLGKFIK AAYSQEMVEK EMCVKGWNWG TARFMGSVLS 120
121 FDK
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [124-447] |
1 11 21 31 41 51
| | | | | |
1 ESKTIFEVPL SHVSQCVTGK NEVTLEFHQN DDAPVGLLEM RFHIPAVESA EEDPVDKFHQ 60
61 NVMSKASVIS ASGESIAIFR EIQILTPRGR YDIKIFSTFF QLHGKTFDYK IPMDSVLRLF 120
121 MLPHKDSRQM FFVLSLDPPI KQGQTRYHYL VLLFAPDEET TIELPFSEAE LRDKYEGKLE 180
181 KEISGPVYEV MGKVMKVLIG RKITGPGNFI GHSGTAAVGC SFKAAAGYLY PLERGFIYIH 240
241 KPPLHIRFEE ISSVNFARSG GSTRSFDFEV TLKNGTVHIF SSIEKEEYAK LFDYITQKKL 300
301 HVSNMGKDKS GYKDVDFGDS DNEN
|
| Detection Method: | |
| Confidence: | 73.69897 |
| Match: | 2gclA |
| Description: | No description for 2gclA was found. |
|
Region A: Residues: [448-550] |
1 11 21 31 41 51
| | | | | |
1 EPDAYLARLK AEAREKEEDD DDGDSDEEST DEDFKPNENE SDVAEEYDSN VESDSDDDSD 60
61 ASGGGGDSDG AKKKKEKKSE KKEKKEKKHK EKERTKKPSK KKK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [551-639] |
1 11 21 31 41 51
| | | | | |
1 DSGKPKRATT AFMLWLNDTR ESIKRENPGI KVTEIAKKGG EMWKELKDKS KWEDAAAKDK 60
61 QRYHDEMRNY KPEAGGDSDN EKGGKSSKK
|
| Detection Method: | |
| Confidence: | 10.69897 |
| Match: | 1wxlA |
| Description: | Solution Structure of the HMG-box domain in the SSRP1 subunit of FACT |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [640-723] |
1 11 21 31 41 51
| | | | | |
1 RKTEPSPSKK ANTSGSGFKS KEYISDDDST SSDDEKDNEP AKKKSKPPSD GDAKKKKAKS 60
61 ESEPEESEED SNASDEDEED EASD
|
| Detection Method: | |
| Confidence: | 1.16 |
| Match: | 2j63A |
| Description: | No description for 2j63A was found. |
