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View Structure Prediction Details

Protein: CG11299-PB, CG11...
Organism: Drosophila melanogaster
Length: 497 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG11299-PB, CG11....

Description E-value Query
Range
Subject
Range
gi|73973701 - gi|73973701|ref|XP_868402.1| PREDICTED: similar to Sestrin-1 (p53-regulated protein PA26) isoform 3 ...
618.0 [0..9] [497..65]

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Predicted Domain #1
Region A:
Residues: [1-184]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYYAVDYYAD MGQISQDCFA ATQTGASDFD MDELDDLDQV TQVIGYHPQF HDHFLATQNF  60
   61 IMKGDGPLPN DYRYYLAIIA AARHQCPYLV KRYEKEFINQ GGDSAWLGGL DFIPAKLRAI 120
  121 YDINKILAHR PWLLRKEHIE RLTKGKNSWS LSEVVHAMVL LSHFHSLSSF VFSCGLTQKL 180
  181 DGLS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 54.522879
Match: 2prrA
Description: No description for 2prrA was found.

Predicted Domain #2
Region A:
Residues: [185-311]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SPKLKSPPAA VAALAPTILI TPTSPTEPQK GKPVLAEISL NNANPDYDSQ TAASSNGGAP  60
   61 PDSANAVADG PDATTLNGYL ATAQQLPQQH GISVETLMER MKVLSQKQDE CSEAELSSRF 120
  121 QKVEQQT

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.14
Match: 1ppjI
Description: Bovine cytochrome bc1 complex with stigmatellin and antimycin
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [312-497]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AELAAVTPEA AVGVPTNLSH YVDDANFIYQ DFARRGTESI NTFRIQDYSW EDHGYSLVDG  60
   61 LYNDVGIFLD AKFRAAYNLT YCTMGGIKNV DTSKFRRAIW NYIQCIYGIR HDDYDYGEVN 120
  121 QLLVRPLKMF IKTACCFPER ITTKDYDSVL VELQDSEKVH VNLMIMEARN QAELLYALRE 180
  181 IMRYMT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle