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View Structure Prediction Details

Protein: CG4019-PC
Organism: Drosophila melanogaster
Length: 261 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG4019-PC.

Description E-value Query
Range
Subject
Range
gi|69111664 - gi|69111664|gb|AAZ03394.1| Aqp4-Luc fusion protein [Reporter vector pmuAqp4-Luc]
245.0 [0..19] [261..11]

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Predicted Domain #1
Region A:
Residues: [1-261]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSHEIRCCKV FKMKGSTLDK ISAFLGELIG TGILVFLGCM GCVKTDLFPN NHLQIVLNFG  60
   61 FAVLIAIQCF GCVSGAHLNP AVTVAAYIYE MVTLRMAFAY FAAQMLGAFI GYGLLMVLLP 120
  121 SPTLTVGAGL CVTLPHTSVT TGQALGIEFV ITSILVIVCC GVWDPRNSKF HDSVGIRFGL 180
  181 AIACLACAAG PFTGGSMNPA RSFAPALWNK HFESNWIYWL APLSSSAITA YAYKVVFRRE 240
  241 VVEAEITSNE KLRQLEDVQL S

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 57.0
Match: 2d57A
Description: Double layered 2D crystal structure of AQUAPORIN-4 (AQP4M23) at 3.2 a resolution by electron crystallography
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle