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View Structure Prediction Details

Protein: CG17664-PA
Organism: Drosophila melanogaster
Length: 265 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG17664-PA.

Description E-value Query
Range
Subject
Range
gi|69111664 - gi|69111664|gb|AAZ03394.1| Aqp4-Luc fusion protein [Reporter vector pmuAqp4-Luc]
237.0 [0..19] [261..11]

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Predicted Domain #1
Region A:
Residues: [1-265]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATTASQSNC WLLQRRQLDS ITTVLAEMIA TAMLMFLGCM GSVENSVFTN SDFQSALNFG  60
   61 FVVLICIQCF GCVCGAHLNP AVTLATYVYN MISLPMALAY FVAQMVGAFI GYGLLKAVLP 120
  121 ESAIYSAENP NGVCLTSLNS TLTPWQGLAV EFLITCVLIS VCCGVWDPRN ATKQDSLPVR 180
  181 FGLAIACLSL TAGQLTGASM NPVRSFAPAI WNGFWDDHWI YWVGPMAAAL ITSVIYKHAF 240
  241 RRELEESEVD ETTMSTKRTS EAELA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 54.69897
Match: 2d57A
Description: Double layered 2D crystal structure of AQUAPORIN-4 (AQP4M23) at 3.2 a resolution by electron crystallography
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle