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View Structure Prediction Details

Protein: Klp59D-PA
Organism: Drosophila melanogaster
Length: 729 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Klp59D-PA.

Description E-value Query
Range
Subject
Range
gi|25009718 - gi|25009718|gb|AAN71034.1| AT07729p [Drosophila melanogaster]
566.0 [0..1] [729..1]

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Predicted Domain #1
Region A:
Residues: [1-79]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRIKIGEQL LFQRSDGRVH QVVCTAKNLE RDSITGEWTE GTVVKGKEVP LSTLIGINHH  60
   61 IFAENQPPIS KPPSSLLPK

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.07
Match: 2o4xB
Description: No description for 2o4xB was found.

Predicted Domain #2
Region A:
Residues: [80-150]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PRGSSPTGGP KTHTGNPYAE RMRVQDGRSK IATRKTDPAA VGAGNHELGR AHTPRVPAGR  60
   61 PDRDASPTQG R

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [151-573]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KSQGGNNSNQ RFSSVVREVN RMKEQREKRR ARQAEQLQEK DALRRNNPGN PNWEVSVMLR  60
   61 QYRSTLIFSP LRCLDPNGGT VQQITVCVRK RPMSRKEENS KNLDIITVPS ADSLIVHELR 120
  121 LKVDLTKFLE HHKFRFDYTF DEECSNALVY DHTARPLIRT MFEGGNATCF AYGQTGSGKT 180
  181 HTMGGEFFGK VQDCGTGIYA MAARDVFEEV SRPEYRQMGA KITCSFFEIY GTKVFDLLLP 240
  241 NKPMLRVLED ARQQVVVVGL TEMPVTKVED VLRLIEHGSK ERTSGQTSAN AKSSRSHAVF 300
  301 QIALHFPDSW GPHGKCSFVD LAGNERGADT QSADRQTRIE GAEINKSLLA LKECIRALSR 360
  361 QSSHLPFRGS KLTQVLRDSF VGGKKNKTCM IAMISPSMSC VENTLNTLRY ADRVKELIAK 420
  421 EDE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 104.0
Match: 2gryA
Description: No description for 2gryA was found.

Predicted Domain #4
Region A:
Residues: [574-729]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HLQSVEGDGE KSPDLNEESE PEMMADEEGD EEPEDEDNQH LTISSEEASS YNNMSYDMSF  60
   61 NHTLNILGPS RNVDIQEVAE QHALLVENLE TYAHNFRQLK TDKEIEQYTQ NSESALMKLL 120
  121 AMVNRTRDVT HNYNTQKLLK EENQNAYKKG ELDESE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.69897
Match: 1dg3A
Description: Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain; Interferon-induced guanylate-binding protein 1 (GBP1), N-terminal domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle