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View Structure Prediction Details

Protein: Gr59c-PA
Organism: Drosophila melanogaster
Length: 397 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Gr59c-PA.

Description E-value Query
Range
Subject
Range
gi|54644197, gi|... - gi|54644197|gb|EAL32938.1| Gr36a [Drosophila pseudoobscura pseudoobscura], gi|125984228|ref|XP_00135...
gi|125984228|ref... - GA16445-PA [Drosophila pseudoobscura], Gr36a [Drosophila pseudoobscura pseudoobscura]
184.0 [0..1] [394..1]

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Predicted Domain #1
Region A:
Residues: [1-216]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVDLVKTILL IAYWYGLAVG VSNFEVDWLT GEAIATRRTT IYAAVHNASL ITLLILFNLG  60
   61 NNSLKSEFIS ARYLHEYFFM LMTAVRISAV LLSLITRWYQ RSRFIRIWNQ ILALVRDRPQ 120
  121 VVRGRWYRRS IILKFVFCVL SDSLHTISDV SAQRKRITAD LIVKLSLLAT LTTIFNMIVC 180
  181 QYYLAMVQVI GLYKILLQDL RCLVRQAECI CSIRNR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [217-397]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RGGVYSIQCC SLADQLDLIA ERHYFLKDRL DEMSDLFQIQ SLSMSLVYFF STMGSIYFSV  60
   61 CSILYSSTGF GSTYWGLLLI VLSTASFYMD NWLSVNIGFH IRDQQDELFR VLADRTLFYR 120
  121 ELDNRLEAAF ENFQLQLASN RHEFYVMGLF KMERGRLIAM LSSVITHTMV LVQWEIQNDE 180
  181 S

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle