YRC Public Data Repository - Protein Structure Prediction

Protein:	Gr59b-PA
Organism:	Drosophila melanogaster
Length:	366 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Gr59b-PA.

Description	E-value	Query Range	Subject Range
gi\|125807455, gi... - gi\|54635574\|gb\|EAL24977.1\| GA15716-PA [Drosophila pseudoobscura], gi\|125807455\|ref\|XP_001360402.1\| G...	502.0	[0..1]	[365..1]

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Predicted Domain #1

Region A:
Residues: [1-170]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVYWMIKLYF RYSLAIGITS QQFSNRKFFS TLFSRTYALI ANIVTLIMLP IVMWQVQLVF  60
   61 QQKKTFPKLI LITNNVREAV SFLVILYTVL SRGFRDTAFK EMQPLLLTLF REEKRCGFKG 120
  121 IGGVRRSLRI LLFVKFFTLS WLCVTDVLFL LYSTDALIWV NVLRFFFKCN

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [171-366]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TNNILEMVPM GYFLALWHIA RGFDCVNRRL DQIVKSKSTR KHRELQHLWL LHACLTKTAL  60
   61 NINKIYAPQM LASRFDNFVN GVIQAYWGAV FTFDLSTPFF WVVYGSVQYH VRCLDYYLID 120
  121 NMCDVAVEYH DSAKHSWSEV RWTKEISSYV IYANSTKLQL WSCGLFQANR SMWFAMISSV 180
  181 LYYILVLLQF HLVMRK