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View Structure Prediction Details

Protein: jbug-PK, jbug-PC...
Organism: Drosophila melanogaster
Length: 410 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for jbug-PK, jbug-PC....

Description E-value Query
Range
Subject
Range
gi|76648752 - gi|76648752|ref|XP_877271.1| PREDICTED: similar to Filamin B (FLN-B) (Beta-filamin) (Actin-binding-l...
427.0 [0..1] [407..1226]

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Predicted Domain #1
Region A:
Residues: [1-268]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSPGLTALG ESTRLVPANT PAVFEILPPP GQSLSKGECV ATVLTPSKSK LNARVTHEAA  60
   61 NGAARIEFVP TEVGTHVIDA SINGTKIAGG PLIAKVYDSS LIQVTEVNGG VVGQACQFRV 120
  121 DASAAGEGQL EISINEGEVP NHVQVVGGGR CLVSFTPEQA KSHLIDIKFN GETVRGCPFV 180
  181 CAVADTSRVL LNLSNLELIP VNRPSSFHIT VSGGGAAELA VSVRGPQGEL PVRVTGDIHA 240
  241 GFTAEFTPTT VGGHSINVEY NGFAVQGT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 35.09691
Match: 1wlhA
Description: Molecular structure of the rod domain of Dictyostelium filamin
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [269-410]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PFLAKSYDAS KVVVGSVSRG TMGRPVQFTV DAGDAGEGNL EITISAKGQN IPTQVHPQGS  60
   61 ARFSVSFVPT ESCEHTINVS FNKMPVPGCP ITVSISGGVA GPQVSLGGPG PVHQTNSFVI 120
  121 NHNGGRLEDI EVNVEGRRNL LY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 64.0
Match: 2j3sA
Description: No description for 2j3sA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle