| Protein: | Gp150-PD |
| Organism: | Drosophila melanogaster |
| Length: | 1076 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Gp150-PD.
| Description | E-value | Query Range |
Subject Range |
|
|
537.0 | [0..123] | [950..167] |
|
Region A: Residues: [1-122] |
1 11 21 31 41 51
| | | | | |
1 MHNLITGPHL LSNPHDISGL PIYRKMSRQS TCRLVLLLAF TLALIHASHS NTVGPKIHFI 60
61 HDDLTENELN SGEEVSPTES LPKISTPKVK DLPVETTTRS PTKKTTSSGT EKSLSEEAWN 120
121 DL
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [123-714] |
1 11 21 31 41 51
| | | | | |
1 MEAAKHSQAL ADDPHFNKML NTTVAAGEKN STDTDDSEYY DYDDDYNYFD EETVTISPSP 60
61 KKAKSNPKLQ PIVDATITKS KSKSNDQKTK ESANDIDSDS QYDYDEGLDD DDDEDDAADD 120
121 LLTDDEQVVF SEDVPCPRFC QCARNVNSYL VATCSRLDMG IQKFGSDITD LVVTNVGPKY 180
181 PILMGPNFFQ NLGLKNVASI KIANCTLEYL HAEAFHGLNE LYAVNLTDVG LAIINPDTFV 240
241 GNKKLRMLTI SGNDLSVMSS IHYLLKSSSI EELDFSRNNL MELNPKAFSH LSNVVYINLS 300
301 QNSLKKLPEK AFEKVTLLEE LDLSYNSLTE LPRDIFNGTT LSILHLKYNT FNGDLHFGTK 360
361 DLQQLDLSFN SIVQVHHSMF DKMPGLTNLN LKGNGIKKIQ PDSFLTLKNL RHIDLSINDL 420
421 DQISGMLFFK NSELDVIRLN DNPRLSQLPT DGFLSYSGEF TVYYLDISNC AIGPLGHKAF 480
481 STMPHLTTLK LAWNNINHLP REIFTGLHKL IDLDLSNNLI TRMDDLIFMD NGELTKLSLA 540
541 GNPISRLSVR LFLPLHQLRC LDVNDCELTT LLSDRDLGAG YKIFDSLRSF NA
|
| Detection Method: | |
| Confidence: | 52.0 |
| Match: | 2a0zA |
| Description: | The molecular structure of toll-like receptor 3 ligand binding domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [715-774] |
1 11 21 31 41 51
| | | | | |
1 SGNLIKKISS EDVKSFKNLR SLDITNNPLK CTPDFQEFIS YVTLQMQMTP KRLPVLANLE 60
61
|
| Detection Method: | |
| Confidence: | 32.221849 |
| Match: | 2z82A |
| Description: | No description for 2z82A was found. |
|
Region A: Residues: [775-909] |
1 11 21 31 41 51
| | | | | |
1 DDATIVQLET LAQAGWSSLA HEVCKHAEGS DLLDEKKADS AEAKLEKRLK ESVKKLNEDE 60
61 AKLLSVLDKS VLDKSRLSSM QKIMKGSVNT ETAKPEEDAD EENLNNGGED KEDDSSDYDS 120
121 EEDDDDDDED DDDDN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [910-1076] |
1 11 21 31 41 51
| | | | | |
1 NDDDRFEEAK KNAKAKADAN KAFDTFVNKE LKPVLKTDGI QAEEVDMSQE TRDKFLLEKL 60
61 GFDSESEESD EYTEKMIFHG ELSYDLVVPL IVVSFCLLMI VLSIARVIYV VLRKRGERYR 120
121 MALLASKNSF VYQKLSEDIV KPTSKEQKEP KHLKQPKVHR YAPINQV
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
