YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CG30281-PA
Organism: Drosophila melanogaster
Length: 291 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG30281-PA.

Description E-value Query
Range
Subject
Range
gi|211718, gi|104643 - gi|211718|gb|AAA48745.1| cytotactin precursor, pir||A32230 tenascin precursor - chicken
298.0 [0..1] [287..1527]

Back

Predicted Domain #1
Region A:
Residues: [1-291]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLYLLCVLI LSGGSLLSTA QSNKLDLVYK KAESMVSSLK IRLEELKQSY KEITEERGSH  60
   61 ETINPSSCLA AGINSNGIHV IEVPGLEPFP VYCDTRLAGS GWTVIQRRQD GSENFYRCWE 120
  121 EYSQGFGELS GEFFMGLEKL HFLTTAEPYE LFVYMEDFNG VVHDARYEDF AIGNASASYA 180
  181 LSVLGKYSGD AGDSLRYHKG MPFSTFDHDD TGHGCARIYV GAWWYDQCQR SNLNGQYLEG 240
  241 GRFEPKMSGR GITWMSWRGY DYGYKFVQMM IRPKCSNNLR RQGMQNALNA H

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 73.69897
Match: 1n86C
Description: Fibrinogen C-terminal domains; Fibrinogen gamma chain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle