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View Structure Prediction Details

Protein: FBpp0292778, CG1...
Organism: Drosophila melanogaster
Length: 436 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0292778, CG1....

Description E-value Query
Range
Subject
Range
gi|28317153 - gi|28317153|gb|AAO39591.1| LD08055p [Drosophila melanogaster]
541.0 [0..1] [436..4]

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Predicted Domain #1
Region A:
Residues: [1-110]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSETDFDAK NGIVDGPTPP HTELAALYKQ SFAYYTFRVR LPSTLATIAD SLVKDKDVLL  60
   61 ATYGAAAEAD IEQTTKEVRQ LRDDILSNGP LLPFGENDSD SEVWNAFLEK 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [111-436]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LPKEKRTYFS VCWLYAECYM YRKISSIFRA TAHLAAYDYF SQQKQTATKL SVDAMLAVAK  60
   61 ATRHNERNSD TFRQLIKLNL WGNRCDLSIT SGKQVKPTGN AFDQVTDLEE KLLIDGTAEV 120
  121 WKALDGASGE GIVDIIFDNA GYELYTDLIL AEYIIDKGLA AKVRFNPKAI PWFISDVMEH 180
  181 DFHWALQFLA DHPDPVLSEV GKKWQRLTTE GKFELSPLEH FWTSPYEFYR MPEVNPSLYD 240
  241 RLKEAQLVIF KGDLNYRKLL GDFSWDSTES FETCLRGFRP SNLCTLRTIK ADLICGLGAG 300
  301 VADQLFAKDK EWMLTGEYGV IQFASK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 50.0
Match: 1xfiA
Description: X-ray structure of gene product from Arabidopsis thaliana At2g17340
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle