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View Structure Prediction Details

Protein: Gr58b-PA
Organism: Drosophila melanogaster
Length: 408 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Gr58b-PA.

Description E-value Query
Range
Subject
Range
gi|54636866, gi|... - gi|54636866|gb|EAL26269.1| GA12328-PA [Drosophila pseudoobscura], gi|125810958|ref|XP_001361690.1| G...
198.0 [0..1] [389..1]

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Predicted Domain #1
Region A:
Residues: [1-168]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLHPKLGRVM NVVYYHSVVF ALMSTTLRIR SCRKCLRLEK VSRTYTIYSF FVGIFLFLNL  60
   61 YFMVPRIMED GYMKYNIVLQ WNFFVMLFLR AIAVVSCYGT LWLKRHKIIQ LYKYSLIYWK 120
  121 RFGHITRAIV DKKELLDLQE SLARIMIRKI ILLYSAFLCS TVLQYQLL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [169-408]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SVINPQIFLA FCARLTHFLH FLCVKMGFFG VLVLLNHQFL VIHLAINALH GRKARKKWKA  60
   61 LRSVAAMHLK TLRLARRIFD MFDIANATVF INMFMTAINI LYHAVQYSNS SIKSNGWGIL 120
  121 FGNGLIVFNF WGTMALMEML DSVVTSCNNT GQQLRQLSDL PKVGPKMQRE LDVFTMQLRQ 180
  181 NRLVYKICGI VELDKPACLS YIGSILSNVI ILMQFDLRRQ RQPINDRQYL IHLMKNKTKV 240
  241 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle