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View Structure Prediction Details

Protein: Gr58c-PA
Organism: Drosophila melanogaster
Length: 412 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Gr58c-PA.

Description E-value Query
Range
Subject
Range
gi|125810956, gi... - gi|54636865|gb|EAL26268.1| GA12324-PA [Drosophila pseudoobscura], gi|125810956|ref|XP_001361689.1| G...
588.0 [0..6] [355..1]

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Predicted Domain #1
Region A:
Residues: [1-66]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNQYFLLHTY FQVSRLIGLC NLHYDSSNHR FILNHVPTVV YCVILNVVYL LVLPFALFVL  60
   61 TGNIYH

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [67-287]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CPDAGMFGVV YNVVALTKLL TMLFLMSSVW IQRRRLYKLG NDLMKMLHKF RFNLGNDCRN  60
   61 RCLCKGLLTS SRFVLLTQQL LTRDSVVNCE SNSSLRQAMV PYQSAAIVYA LIMILLMSYV 120
  121 DMTVYMVEVA GNWLLVNMTQ GVREMVQDLE VLPERNGIPR EMGLMQILAA WRKLWRRCRR 180
  181 LDALLKQFVD IFQWQVLFNL LTTYIFSIAV LFRLWIYLEF D

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [288-412]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KNFHLWKGIL YAIIFLTHHV EIVMQFSIFE INRCKWLGLL EDVGNLWDIN YSGRQCIKSS  60
   61 GTILSRKLEF SLLYMNRKLQ LNPKRVRRLH IVGLFDLSNL TVHNMTRSII TNVLVLCQIA 120
  121 YKKYG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle