YRC Public Data Repository - Protein Structure Prediction

Protein:	Grx-1-PA
Organism:	Drosophila melanogaster
Length:	116 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Grx-1-PA.

Description	E-value	Query Range	Subject Range
gi\|46443262, gi\|... - gi\|77022768\|ref\|XP_888828.1\| hypothetical protein CaO19_6509 [Candida albicans SC5314], gi\|68470145\|... gi\|238883366 - gi\|238883366\|gb\|EEQ47004.1\| glutaredoxin [Candida albicans WO-1] gi\|76573641 - gi\|76573641\|dbj\|BAE44725.1\| hypothetical protein [Candida albicans]	135.0	[0..1]	[115..41]
gi\|54636851\|gb\|E... - GA20735-PA [Drosophila pseudoobscura], GA20735 [Drosophila pseudoobscura pseudoobscura] gi\|195154360, gi... - gi\|195154360\|ref\|XP_002018090.1\| GL16951 [Drosophila persimilis], gi\|194113886\|gb\|EDW35929.1\| GL1695... gi\|125810928, gi... - gi\|54636851\|gb\|EAL26254.1\| GA20735 [Drosophila pseudoobscura pseudoobscura], gi\|125810928\|ref\|XP_001...	133.0	[0..1]	[116..1]
gi\|15637350 - gi\|15637350\|gb\|AAL04507.1\|AF406809_1 glutaredoxin [Tilia platyphyllos]	131.0	[0..24]	[115..5]
gi\|194186144, gi... - gi\|195477545\|ref\|XP_002086354.1\| GE23086 [Drosophila yakuba], gi\|194186144\|gb\|EDW99755.1\| GE23086 [D... CG6852-PA, FBpp0... - This gene is referred to in FlyBase by the symbol Dmel\CG6852 (CG6852, FBgn0036820). It is a protein... gi\|194197424, gi... - gi\|195591372\|ref\|XP_002085415.1\| GD14776 [Drosophila simulans], gi\|194197424\|gb\|EDX11000.1\| GD14776 ... gi\|220950040, gi... - gi\|220959054\|gb\|ACL92070.1\| CG6852-PA [synthetic construct], gi\|220950040\|gb\|ACL87563.1\| CG6852-PA [...	130.0	[0..1]	[116..1]
gi\|116310771, gi... - gi\|125548975\|gb\|EAY94797.1\| hypothetical protein OsI_16580 [Oryza sativa Indica Group], gi\|116310771... GRXC6_ORYSA, GLR... - Glutaredoxin-C6 (Glutaredoxin-C2 homolog 1) - Oryza sativa (Rice), (P55142) Glutaredoxin GRXC6_ORYSJ - Glutaredoxin-C6 OS=Oryza sativa subsp. japonica GN=GRXC6 PE=1 SV=2	130.0	[0..22]	[115..3]
gi\|2724050, gi\|2... - gi\|2724056\|gb\|AAB92658.1\| glutaredoxin type I [Fritillaria agrestis], gi\|2724054\|gb\|AAB92657.1\| glut...	130.0	[0..22]	[115..3]
GLRX_ORYSA - (P55142) Glutaredoxin	129.0	[0..22]	[115..3]
gi\|19548658 - gi\|19548658\|gb\|AAL90750.1\| glutaredoxin [Populus tremula x Populus tremuloides]	128.0	[0..2]	[115..13]
gi\|47217740 - gi\|47217740\|emb\|CAG03692.1\| unnamed protein product [Tetraodon nigroviridis]	128.0	[0..1]	[116..1]
gi\|113869291, gi... - gi\|113869291\|ref\|YP_727780.1\| glutaredoxin-like protein [Ralstonia eutropha H16], gi\|113528067\|emb\|C...	127.0	[0..3]	[116..8]

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Predicted Domain #1

Region A:
Residues: [1-116]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTVVSTLQR PTLYVSMDSS HAQFVRDTIS GNKVVIFSKS YCPYCSMAKE QFRKINVKAT  60
   61 VIELDQRDDG NEIQAVLGEM TGSRTVPRCF IDGKFVGGGT DVKRLYEQGI LQKYFQ

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	27.69897
Match:	2ht9A
Description:	No description for 2ht9A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits