| Protein: | LBR-PC |
| Organism: | Drosophila melanogaster |
| Length: | 741 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LBR-PC.
| Description | E-value | Query Range |
Subject Range |
|
|
559.0 | [0..192] | [741..94] |
|
Region A: Residues: [1-347] |
1 11 21 31 41 51
| | | | | |
1 MQHSPSTTTD HIHFAARFFD RNSYTMDRRL RRPRRTEDVS SGPLLAQSKQ PSLLPVTRRT 60
61 GSVTAAGATA TATATAGPAT RTRASPSRNK VVAPPSPDLG PRTRRSSRPR SSVGPLTGSG 120
121 SGSSLPIKAA IKARTPIPEV SEVSSPIRLS TSNLPMTLTT NTSSGAPNKA FNTSSVNSGN 180
181 SFSRTTTSST TTTTERIEIR AEGDGEVDTD SIRKRITERL RRSVSKTISN LAGTPVTNTE 240
241 EGSRYSRSVS RSVYDDEKSS KRSYSTGEED IDEEDELEED QFRSFNVTRK SATPAEISCR 300
301 QLKAPREFGG WLGAFLFLLL LPTAVYYLTW SCTARNACQF KHLNLGI
|
| Detection Method: |  |
| Confidence: | 2.16 |
| Match: | 1h1kI |
| Description: | THE BLUETONGUE VIRUS (BTV) CORE BINDS DSRNA |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [348-561] |
1 11 21 31 41 51
| | | | | |
1 LLDVNYLTRQ VFQPRVVGAF AAYQVVVFLL VALLPGRRVH LTRETYKFNC LAVSLTLLIA 60
61 SGVAEYLKYP VVTFVLRHYL RFCIFGLVGA FVAAAWSYWL VDTAKYNVLR QTLTNDYGRT 120
121 GSFVVDFALG RQLNPKWLGR VDWKQFQYRL SLVTTLIYAT CYIYQTLVWP QKPQLGEQEG 180
181 YLYQAKYYWN NVNYDPATLF SASCLLFYVL DAII
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [562-741] |
1 11 21 31 41 51
| | | | | |
1 FEHHLSSSFE LQHEGYGCLL LLRYAATPYL LTAVTKYFYE QRVPISCWYA PLAVAALLSL 60
61 GLLVKRFSCA YKYKYRLNSQ SPIFANIETI HTYQGSRLLL SGMWGWVRQP NYLGDIVALL 120
121 ALAAPMALRP AWPPVLGLSL IILLLLHRAT RANARNQARY HSSWQRYSTQ VRSYILPRVY 180
181
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
