YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CG9865-PB, CG9865-PA
Organism: Drosophila melanogaster
Length: 466 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG9865-PB, CG9865-PA.

Description E-value Query
Range
Subject
Range
gi|115932072, gi... - gi|115932072|ref|XP_001188803.1| PREDICTED: similar to Pigm protein [Strongylocentrotus purpuratus],...
398.0 [0..29] [450..12]

Back

Predicted Domain #1
Region A:
Residues: [1-81]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTQTKAATTG WQRLGRRILY TSFRTHLLIS ALLRIALICY GQLHDSQSAV PYTDIDYKVV  60
   61 TDGARQVLAG DTPFARHTYR Y

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [82-154]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SPIMAYLQTF NILLHPAWGK LLYATFDLLI ATLIYRLVHM EIKSQYQKTV QHLLSKFNRP  60
   61 RDSDQSLDAL DER

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [155-304]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SHPENLARAS ACFWLYNPLT AVISTRGSGD CFSSFFVILT IYLLLKSEHN VTRSYWLIFG  60
   61 AGLAHGLVIH LRLYPLLFSL AYYLSLSTRL TQTPLDFLCQ ILRPNKQQLC LISGTLISLV 120
  121 AFTWTFYTMY GWEYIYEAYL YHFVRKDPRH 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [305-466]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NFSLQFLLQY LGSASSVAEP SAILKTLVLA PQFLLILYLS LSFGQFRQTL PFCIFAVAFV  60
   61 IVTYNSVVTS QYFIWYLAIL PLCLNNFKML SWRRCFGLLF LWLLAQALWL LPAYLLEFHT 120
  121 WNTFYWIGLQ GAVFFATNGY ILEQLLSHYG FTQFKISYRK LL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle