| Protein: | CG4050-PB, CG4050-PA |
| Organism: | Drosophila melanogaster |
| Length: | 926 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG4050-PB, CG4050-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
677.0 | [0..33] | [886..5] |
|
Region A: Residues: [1-261] |
1 11 21 31 41 51
| | | | | |
1 MSTNPNPGIH QYAPSTLPRE REREGATNSP QRNLLEFLCI CVACIVCYYN STQCGLVFDD 60
61 ISAIRDNKDL RPHTPLINVF LNDFWGTPMR KEQSHKSYRP LTVLTFRFNY LLHALEPFGY 120
121 HLVNLLLHLS VCLLWRRVCR LLLRQCAASG SNAISAPSSS SVSQLNTCAF VASLLFAVHP 180
181 VHTEAVTGVV GRAELLSSIC FLAAFLSYAK SVGDSGCPRR TNWLTLFGCF GSCLLASMLC 240
241 KEQGITIAGI CVVYELFVVH Q
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [262-405] |
1 11 21 31 41 51
| | | | | |
1 LRPLHLCHFV LRLFDERTEQ QSPKLANPSG IRRWSSSTLW KRLSFLVGIT LTLLVGRVYV 60
61 MGSQLPIFTR FDNPASAADT PERQLTYGYL IYLNCWLLLC PSLLCCDWTM GTVPLLQGFT 120
121 DSRNITTLLT FLALGAMVAK TCFT
|
| Detection Method: | |
| Confidence: | 31.744727 |
| Match: | PF08409.2 |
| Description: | No description for PF08409.2 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [406-836] |
1 11 21 31 41 51
| | | | | |
1 RNLALSRTLI MCLGWMVLPF LPASNLFFPV GFVVAERILY MPSMGYCLLV AYGFEQLQRR 60
61 GSLSWQRFSQ AALAILLLTH ALKTHQRNLD WRTEYSLFMS GVHVNQRNAK LYNNVGHALE 120
121 NEGKFEEALL YFQQAVRIQT DDIGAHINVG RTFNNLKRYA EAEQAYVQAK ALFPQAKPGV 180
181 SYHARIAPNH LNVFINLANL IAKNQTRLEE ADHLYRQAIS MRSDYVQAYI NRGDILMKLN 240
241 RTAQAQEVYE QALLYDNENA DIYYNLGVVF LEQGKSQQAQ VYFNKAIELY PEHEQALLNS 300
301 AILLQELGGE EARRVSRSRL YKVLENDDQN EKVYFNLGML AMDESSFDEA EQFFKRAIHL 360
361 KADFRSALFN LALLLADTKR PLDAVPFLNQ LIRHHPSHVK GLILLGDIYI NHMKDLDEAE 420
421 KCYRSILHYD P
|
| Detection Method: | |
| Confidence: | 70.154902 |
| Match: | 1w3bA |
| Description: | The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha. |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.911909606569877 | bayes_pls_golite062009 |
| protein binding | 0.420010637453541 | bayes_pls_golite062009 |
|
Region A: Residues: [837-926] |
1 11 21 31 41 51
| | | | | |
1 HNTQGLHNLC VVFVERKRLA KAAACLQYAQ RLAPAEDYIG RHLQIVLARL QKINKLPESA 60
61 PERKLAYEDY DPLEFKLPQD RPTHKSRKRS
|
| Detection Method: | |
| Confidence: | 28.69897 |
| Match: | 2q7fA |
| Description: | No description for 2q7fA was found. |
