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View Structure Prediction Details

Protein: CG10527-PA
Organism: Drosophila melanogaster
Length: 296 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG10527-PA.

Description E-value Query
Range
Subject
Range
gi|21483472 - gi|21483472|gb|AAM52711.1| LD46156p [Drosophila melanogaster]
432.0 [0..1] [296..13]
gi|125811549, gi... - gi|54637090|gb|EAL26493.1| GA10372 [Drosophila pseudoobscura pseudoobscura], gi|125811549|ref|XP_001...
gi|125811549|ref... - GA10372-PA [Drosophila pseudoobscura], GA10372 [Drosophila pseudoobscura pseudoobscura]
396.0 [0..1] [296..1]
gi|116117975, gi... - gi|118790501|ref|XP_318631.3| ENSANGP00000021029 [Anopheles gambiae str. PEST], gi|116117975|gb|EAA1...
389.0 [0..3] [295..2]
gi|94469034, gi|... - gi|94469034|gb|ABF18366.1| farnesoic acid o-methyltransferase-like protein [Aedes aegypti], gi|1571...
382.0 [0..3] [295..5]
gi|91078970 - gi|91078970|ref|XP_974395.1| PREDICTED: similar to AGAP009604-PA [Tribolium castaneum]
354.0 [0..1] [294..1]
gi|66508910 - gi|66508910|ref|XP_623146.1| PREDICTED: similar to CG10527-PA isoform 1 [Apis mellifera]
345.0 [0..1] [294..1]

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Predicted Domain #1
Region A:
Residues: [1-140]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPIEVNTPDK LEYQFFPASG GVFTFKVRSP KDAHLALTPA PEENGPIFEI FLGGWENTKS  60
   61 VIRKDRQKPE VAEVPTPGIL DAGEFRGFWV RWYDNVITVG REGDAAAFLS YDAGSLFPVN 120
  121 FVGICTGWGA SGTWLIDEPA 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.523 N/A N/A b.1.10 Clathrin adaptor appendage domain
View Download 0.512 N/A N/A b.60.1 Lipocalins
View Download 0.505 N/A N/A b.60.1 Lipocalins
View Download 0.373 N/A N/A b.60.1 Lipocalins
View Download 0.355 N/A N/A b.60.1 Lipocalins

Predicted Domain #2
Region A:
Residues: [141-296]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PSAPVMGFAA PTGSGPGCWV PAANGEVPPN ALEGGFDSSE QLYIARARHE GDLIPGKLHP  60
   61 SHGVTYVAWG GGEHGHAEYE VLCAGGGQWL PVDAGNIPPN ALPAGETAEG EPLFIGRATH 120
  121 DGTITVGKVQ PSHGCCYIPY GGEELAYKEF EIYVTN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle