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View Structure Prediction Details

Protein: CG33786-PA
Organism: Drosophila melanogaster
Length: 248 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG33786-PA.

Description E-value Query
Range
Subject
Range
gi|71676651, gi|... - gi|71676651|ref|ZP_00674392.1| Hydrogenase maturation protein HypF [Trichodesmium erythraeum IMS101]...
244.0 [0..3] [247..147]

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Predicted Domain #1
Region A:
Residues: [1-248]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRLQTSLYR LLRAHHTSSR MQHQASELRT PVCAVGDEAA LQLARQCLLG GQVIALPTDT  60
   61 VYGLACDANN ETAIQQLYEI KGRDEHKPVA ICVHNIDALR RFGQAAHLSD ELLTRLLPGP 120
  121 LTIVIERTSQ LSNRFLNPST SKIGIRIPDF NFMRDLCAVW QEKPLALTSA NRSSAPSSLQ 180
  181 VSEFRSLWPQ LGAVFDAGRI GLTEERRLAS TVIDLATPGY YEIVRAGVAL KPTLSLMEEF 240
  241 GIRELKMM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 43.522879
Match: 1jcuA
Description: Hypothetical protein MTH1692
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.410994327621936 bayes_pls_golite062009
nucleic acid binding 0.361789738594781 bayes_pls_golite062009
catalytic activity 0.343636936190038 bayes_pls_golite062009
RNA binding 0.119986061060909 bayes_pls_golite062009
protein binding 0.0580085924119811 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle