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View Structure Prediction Details

Protein: Nnf1a-PA
Organism: Drosophila melanogaster
Length: 194 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Nnf1a-PA.

Description E-value Query
Range
Subject
Range
Nnf1b-PA - The gene Nnf1b is referred to in FlyBase by the symbol Dmel\Nnf1b (CG31658, FBgn0051658). It is a pr...
340.0 [0..2] [193..6]

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Predicted Domain #1
Region A:
Residues: [1-194]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEDSEAAFKR HEGVGPKVKQ AYEEAIKQIF ADLSCADLQA WDAIYQEHEQ SALDTESIVD  60
   61 RTRSLMTKVV LEMNRCFFAS NDVPNKLQTL EMLKEHFAAY EGKKWNVNTA APDKLTRPLR 120
  121 MRFLDFSVEF MEQQLASQAK ELEIAMAKSN ANRERLQHVH DKRLKLTVQM EQQLSQYEKV 180
  181 KTELIKLGEA LNDF

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.99
Match: 1jchA
Description: Ribonuclease domain of colicin E3; Colicin E3 translocation domain; Colicin E3 receptor domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle