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View Structure Prediction Details

Protein: CG11200-PA, FBpp...
Organism: Drosophila melanogaster
Length: 355 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG11200-PA, FBpp....

Description E-value Query
Range
Subject
Range
gi|125809471|ref... - GA10835-PA [Drosophila pseudoobscura], GA10835 [Drosophila pseudoobscura pseudoobscura]
gi|195154797, gi... - gi|195154797|ref|XP_002018299.1| GL16836 [Drosophila persimilis], gi|194114095|gb|EDW36138.1| GL1683...
gi|125809471, gi... - gi|54636308|gb|EAL25711.1| GA10835 [Drosophila pseudoobscura pseudoobscura], gi|125809471|ref|XP_001...
274.0 [0..1] [355..1]

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Predicted Domain #1
Region A:
Residues: [1-355]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLGTLLWIFF VGLLLCAFLF SKTTKEFPKS WFEWKTEFRY QYLGIVGLVH DAQYKARDRV  60
   61 ALYKQPDRIA VITGGNRGIG LRIVEKLLAC DMTVVMGVRD PKIAETAVAS IVDLNATKGK 120
  121 LICEQLDVGD LKSVKAFAQL IKERYSKVDL LLNNAGIMFA PFKLTADGYE SHFAINFLGH 180
  181 FLLTHLLLPQ LRAAGKEGRN SRIVNVSSCV NLIGRINYKD INGTKHYYPG TAYSQSKLAQ 240
  241 ILFTRHLQTL LDAEKSHVQV NVVHPGIVDT DLFEHSATTS VPIFKKLFFK TPERGSRTVV 300
  301 FAAIDPSIEG QGGTYLSNGG KGPFHPDAKK PAKCEQLFQF SCDLLKIQQY GNGEY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 66.0
Match: 2p68A
Description: No description for 2p68A was found.

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Created and Maintained by: Michael Riffle