YRC Public Data Repository - Protein Structure Prediction

Protein:	plu-PA
Organism:	Drosophila melanogaster
Length:	174 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for plu-PA.

Description	E-value	Query Range	Subject Range
gi\|115621182, gi... - gi\|115951148\|ref\|XP_001197526.1\| PREDICTED: similar to ankyrin 2,3/unc44 [Strongylocentrotus purpura...	197.0	[0..2]	[170..167]
gi\|115433911, gi... - gi\|115433911\|ref\|XP_001217610.1\| conserved hypothetical protein [Aspergillus terreus NIH2624], gi\|11...	196.0	[0..2]	[172..968]
gi\|108868779, gi... - gi\|157106769\|ref\|XP_001649474.1\| ankyrin 2,3/unc44 [Aedes aegypti], gi\|108868779\|gb\|EAT33004.1\| anky...	193.0	[0..3]	[171..52]
gi\|99034481 - gi\|99034481\|ref\|ZP_01314472.1\| hypothetical protein Wendoof_01000724 [Wolbachia endosymbiont of Dros...	191.0	[0..3]	[172..146]
gi\|66847484, gi\|... - gi\|70990006\|ref\|XP_749852.1\| Pfs, NACHT and Ankyrin domain protein [Aspergillus fumigatus Af293], gi...	191.0	[0..2]	[171..1316]
gi\|56698944 - gi\|56698944\|gb\|AAW23170.1\| ankyrin domain protein [Wolbachia pipientis]	189.0	[0..3]	[172..145]

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Predicted Domain #1

Region A:
Residues: [1-174]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGEINALSCV GQDDVVSLRI VCTMARDGKQ HNLEDVDMYG NTALLKACYL GRFECARTLL  60
   61 EFGANIFAMN YFGQNALTLA TYAGHLTLVK ELLRRRSYKD FNLSSMIPAL CVATLQKHSA 120
  121 LVAYFTQLDS RGVQETQTVH GLGVAELRGM IKAAGRLDKR NVRSPPTFIS NRLR

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	40.522879
Match:	1n11A
Description:	Ankyrin-R
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits