| Protein: | hrg-PA, hrg-PB, ... |
| Organism: | Drosophila melanogaster |
| Length: | 659 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for hrg-PA, hrg-PB, ....
| Description | E-value | Query Range |
Subject Range |
|
|
643.0 | [0..1] | [659..1] |
|
Region A: Residues: [1-551] |
1 11 21 31 41 51
| | | | | |
1 MWNSEPTHRQ HHQHNGNSTS GGPPAKQLGM TSAISLAEPR PEDLQRTDEL RGSLEPYNVF 60
61 ESQDELNHRM EILAKLNTLV KQWVKEISVS KNMPESAAEK LGGKIYTFGS YRLGVHHKGA 120
121 DIDALCVAPR NIERTDYFQS FFEVLKKQPE VTECRSVEEA FVPVIKMNFD GIEIDLLFAR 180
181 LSLKEIPDDF DLRDDNLLRN LDHRSVRSLN GCRVTDEILA LVPNIENFRL ALRTIKLWAK 240
241 KHGIYSNSLG YFGGVTWAML VARTCQLYPN AAAATLVHKF FLVFSRWKWP NPVLLKHPDN 300
301 VNLRFQVWDP RVNASDRYHL MPIITPAYPQ QNSTFNVSES TKKVILTEFN RGMNITDEIM 360
361 LGRIPWERLF EAPSFFYRYR HFIVLLVNSQ TADDHLEWCG LVESKVRLLI GNLERNPHIA 420
421 LAHVNPKCFE FKKGQSANNS QNNSGNEDDL KQSQGNQSAV TSAPFCSMWF IGLEFERSEN 480
481 LNVDLTESIQ NFTEHVMMHG VNIKMLKEGM TIDARHVKRK QLSLYLDSDF LKRERKSMES 540
541 HNNFNNTLLA N
|
| Detection Method: |  |
| Confidence: | 155.0 |
| Match: | 1q78A |
| Description: | Crystal structure of poly(A) polymerase in complex with 3'-dATP and magnesium chloride |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| RNA binding | 2.46555984694381 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 1.61922062344227 | bayes_pls_golite062009 |
| nucleic acid binding | 1.43322212500405 | bayes_pls_golite062009 |
| polynucleotide adenylyltransferase activity | 1.24026612395993 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 1.08480919674453 | bayes_pls_golite062009 |
| DNA binding | 0.920001549206154 | bayes_pls_golite062009 |
| binding | 0.888087430062829 | bayes_pls_golite062009 |
| catalytic activity | 0.75232920999699 | bayes_pls_golite062009 |
| transferase activity | 0.432029324907561 | bayes_pls_golite062009 |
|
Region A: Residues: [552-659] |
1 11 21 31 41 51
| | | | | |
1 RKRLSTELAQ SQDPLPPGQQ PSSGNRGRDS GAKIQRLSDS LTEENSNASS DMGAGTPTTP 60
61 TTAQLSAPSF KSSGKNGSEI DVVEQEPTQP HNNGNASSNT TTTEVACS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
