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View Structure Prediction Details

Protein: Oseg6-PA
Organism: Drosophila melanogaster
Length: 1366 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Oseg6-PA.

Description E-value Query
Range
Subject
Range
gi|109500607, gi... - gi|62660468|ref|XP_223412.3| PREDICTED: similar to WD repeat membrane protein PWDMP [Rattus norvegic...
846.0 [0..24] [1366..25]

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Predicted Domain #1
Region A:
Residues: [1-157]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFEKILYKY EEPHGIGDVY FIWQKALLAT TGTDGSVALY NRQGQLVQRI ILSGLCSGFA  60
   61 WDQEGDLLGI ITSGSPNITL WDYNSQEKIS VETGLRDPLT CILWSKQQQL LAVGTGRGNL 120
  121 AIYNHSSGKR PTPVLGKHSK RITCGAWSAQ NLLALGS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 62.39794
Match: 1nr0A
Description: Actin interacting protein 1
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [158-305]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EDKSFSLSNE DGDTVRVVQL RDAPTDMYFA EMANDERIAG DNAISMIIGK RTLFLYYLPE  60
   61 PENPTELGFQ SRYGSLMQHK WFGDGYILLG FSNGHVVAIS THPKDVGQEL WQVKNHKDSL 120
  121 TGLAYCPTLD IVASCGDDSI KIHSITNL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 5.0
Match: 1r9nA
Description: Crystal Structure of human dipeptidyl peptidase IV in complex with a decapeptide (tNPY) at 2.3 Ang. Resolution
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [306-871]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QETERIITVP DHAGVQMIDW SPDGQLLAVT TNHGTVYIYV TKLPHLFAVS APRIVLLSSL  60
   61 AEVSIYVYAP DKTKSLPFRL PLEGEPTFMA VGPYNFATGI EKHVWFYDLG KSLGEEPRPL 120
  121 SERDFPRSVE SMKLNADYCA ALCPPQLILQ AIAADNPNCK DKLQAVFPTA LPNMPSDAVI 180
  181 TCFALSQELL IFATDIGHLV FYSLEKWDSC TIYRHSMGIR QLFMDIEGTK VIFIDDHSQG 240
  241 YVFLPVVEEA LLIPDIPKQC LGCLWDLTQP NIFISYDARI VNTHVFVRHS VQGTHTLMVG 300
  301 ESKLNPGQFP LLLCGGEMAL HIDGGQYATQ SLSTHVVNPS NSQAANLQML LKLRNYDEAY 360
  361 KLCKQMNQSS AWREFGEQAI SDLEPDIAIR AYRQLGDAAL VNALSELRYV EDLDMLIGCC 420
  421 CTLLAQYDQA KEHMLKGVYT RAALDLCRDL LQWDQALLLA HKNDPQEVPY IAREYAQQLE 480
  481 FNGNYTDALY HYEKGYKEDL INSKETETDA LMDSSPEYEE HVRLCKMGIA RTSIRAGDFR 540
  541 RGIQYAVELE DQQLLFDCAE LLATVG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 6.39794
Match: 2gbcA
Description: No description for 2gbcA was found.

Predicted Domain #4
Region A:
Residues: [872-1125]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HLTEAAGLYE RGGFYDEACG HYIALKMWNK ANNILPKVKS TKLHAAYAKA KENDGHYEEA  60
   61 IRSYRIAGDL DACVRIYLDH LCDPHAASEI VLESRSMDSA KLLAKFYQKI GDVEQALQFL 120
  121 VICGCVEEAF ALAQRHNKLR RHGELLERYE NAKSSDYLAL AHYFEGEKYT LLAGKYYFLA 180
  181 REFTKALRFL LKASAFNNEE QVSLSLAIDC VATSNNEQLA TQLIEFLLGE VDGVPKDPRY 240
  241 LFRLYMARKH YKDA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.221849
Match: 1qz2A
Description: Crystal Structure of FKBP52 C-terminal Domain complex with the C-terminal peptide MEEVD of Hsp90
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.531860751042522 bayes_pls_golite062009

Predicted Domain #5
Region A:
Residues: [1126-1161]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AKTAVIIANQ EQIAGNYKSA RDLLYSMYQE LRRNNL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.0
Match: 1wao1
Description: PP5 structure
Matching Structure (courtesy of the PDB):

Predicted Domain #6
Region A:
Residues: [1162-1243]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SVTAEMRHQF ILLHRYTLVR IHVKLGNHLL AAKLLVQVAA CISQFPEHII PILTSTVIEC  60
   61 HRAGLKKSAF TYASTLMRPD YR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 6.0
Match: 2ho1A
Description: No description for 2ho1A was found.

Predicted Domain #7
Region A:
Residues: [1244-1366]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NQLDPRYAKK IESIVRKAPK GIKQLRDEID GETMECPICD SNLANMEVTC YSCKTTLPIC  60
   61 IATGQHIIKQ LMTSCPQCDF LCFRAEMENI LSENGECPMC GENVAPEQLL DVEDIRPYIL 120
  121 AAS

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.32
Match: 1u6gB
Description: Crystal Structure of The Cand1-Cul1-Roc1 Complex
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 1.60928341417249 bayes_pls_golite062009
protein binding 1.13053895005339 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle