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View Structure Prediction Details

Protein: betaTub56D-PA
Organism: Drosophila melanogaster
Length: 456 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for betaTub56D-PA.

Description E-value Query
Range
Subject
Range
gi|48095525 - gi|48095525|ref|XP_392313.1| PREDICTED: similar to -Tubulin at 56D CG9277-PB, isoform B [Apis mellif...
595.0 [0..5] [456..1]

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Predicted Domain #1
Region A:
Residues: [1-456]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLIGARPIHR VYDGVHGWPK PRSRAQTCFW EIISDEHGID ATGAYHGDSD LQLERINVYY  60
   61 NEASGGKYVP RAVLVDLEPG TMDSVRSGPF GQIFRPDNFV FGQSGAGNNW AKGHYTEGAE 120
  121 LVDSVLDVVR KEAESCDCLQ GFQLTHSLGG GTGSGMGTLL ISKIREEYPD RIMNTYSVVP 180
  181 SPKVSDTVVE PYNATLSVHQ LVENTDETYC IDNEALYDIC FRTLKLTTPT YGDLNHLVSL 240
  241 TMSGVTTCLR FPGQLNADLR KLAVNMVPFP RLHFFMPGFA PLTSRGSQQY RALTVPELTQ 300
  301 QMFDAKNMMA ACDPRHGRYL TVAAIFRGRM SMKEVDEQML NIQNKNSSYF VEWIPNNVKT 360
  361 AVCDIPPRGL KMSATFIGNS TAIQELFKRI SEQFTAMFRR KAFLHWYTGE GMDEMEFTEA 420
  421 ESNMNDLVSE YQQYQEATAD EDAEFEEEQE AEVDEN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 165.0
Match: 1ffxB
Description: Tubulin:stathmin-like domain complex
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle