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View Structure Prediction Details

Protein: CG10737-PC, CG10...
Organism: Drosophila melanogaster
Length: 944 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG10737-PC, CG10....

Description E-value Query
Range
Subject
Range
gi|16183606 - gi|16183606|gb|AAL13712.1| GM13116p [Drosophila melanogaster]
564.0 [0..1] [944..1]

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Predicted Domain #1
Region A:
Residues: [1-164]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLADQIDDY ICSFEGLGDL TMDSLAIFIF LWAVLALFSV WLIKLLYHKY LNKDKSASAA  60
   61 NSRQTSVAPT SGSPTSVAGK TEKRLSEPRD LLATKSKVEG LDLSKPLAGA SGGRGRSSAS 120
  121 PLNTAGAAAG GPRRRVVRQS STGPENRKKR YVPPPSNVVG PETS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [165-498]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SVTWTSQVFR WLYSDLVIVN ELLMSWVIAI NDTLRKSVEE HGVAVEVVRV LPDSPAPGLN  60
   61 NIFCNCDENN PADMLITFDC DAMPVLQVKT FRQKSGKVET SHYKVTVSRF RARMAIPMNY 120
  121 NSLKGEMRVE GYPDVRIAMN SVGAIKAMDQ DEQQLQTVIS DILTTALRDT IYPVDFSIYS 180
  181 TCPRAEVEPL DLPHNMEQHM GGVGLRDSQH MVSGRRLLVK IVKGDGIRDA QNPYVVIEMD 240
  241 EPAQKNQTGT QRGGKPFWDE HFLFELSPQS AEILFEVYDH PVIASDPPKF LGLGLVGIDE 300
  301 LAVGPASTQL LQLQPRPYET QPVSGAITVD FVFI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 29.69897
Match: 1dqvA
Description: Synaptogamin I
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [499-735]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EGAEIPAGAR PQRLKEALRL STPAINEHIR NGADLADAAV RALQDGALSS SGSGGQPSKS  60
   61 TLIIHSVQRN SSSPNAFKVE LNRDGQIEVT DTATELDQAV AQAFERAANE AQTELELELA 120
  121 KEEKSSQLGE PLIDSGNGTV NEESTAEFGQ PNAASSPNGS SYHNNYSLNG NGNSNGAGSG 180
  181 GYNSLPRNGG AQQLAQQSGL LEGHDVVDDR GRSKKRNFFG TLKKRLSRSK TRTLSAD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [736-944]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QPNNNSHKSL SATNSNTTTA TGFPRTATGT LNGDSSRSLS VDRATLSKSN SLGPRMGIGH  60
   61 SITDHSRRSS ISESSAISGF SSASNKTYVH EASTLVLETI ENGIKRHFIV PLAIAQRPRW 120
  121 RRKGTKLHIY NDHTFIAKHL SGSGLQCSIC MKSIPRRPGK QGYECRDCQL ISHKQCHIRA 180
  181 PQACPNPTVL SMELTSFPVL TERDINLVN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 12.69897
Match: 1xa6A
Description: Crystal Structure of the Human Beta2-Chimaerin
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.0980674097362609 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle