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View Structure Prediction Details

Protein: DptB-PA
Organism: Drosophila melanogaster
Length: 120 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DptB-PA.

Description E-value Query
Range
Subject
Range
gi|25012940 - gi|25012940|gb|AAN71556.1| RH29451p [Drosophila melanogaster]
183.0 [0..1] [120..11]
gi|33328981 - gi|33328981|gb|AAQ09897.1| CG10794 [Drosophila yakuba]
178.0 [0..1] [120..1]
DIPD_PROTE - Diptericin-D OS=Protophormia terraenovae PE=1 SV=1
126.0 [0..7] [120..3]
gi|2582347 - gi|2582347|gb|AAB82532.1| diptericin [Drosophila mauritiana]
125.0 [0..1] [120..1]

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Predicted Domain #1
Region A:
Residues: [1-120]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHFTASLLFI GLACAFSSAW AYPYPDPREI VNLQPEPLAY APNFDVPLHR VRRQFQLNGG  60
   61 GGGSPKQGFD LSLNGRAPVW QSPNGRHSFD ATGSYAQHLG GPYGNSRPQW GAGGVYTFRF 120
  121 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.996
Match: 1i78A
Description: Outer membrane protease OMPT
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle