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View Structure Prediction Details

Protein: gi|24655184, gi|...
Organism: Drosophila melanogaster
Length: 561 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24655184, gi|....

Description E-value Query
Range
Subject
Range
gi|73988924 - gi|73988924|ref|XP_854917.1| PREDICTED: similar to Sodium- and chloride-dependent glycine transporte...
558.0 [0..8] [559..288]

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Predicted Domain #1
Region A:
Residues: [1-561]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTQLEISKKS EKPAEKPAEQ WGNGLEFLFS CISLSVGLGN IWRFPYIAFQ NGGGTFVIPY  60
   61 LIALLVIGRP VYYLEISLGQ FTGRGVVKAF DMAPLLKGVA LGQVLATAAS ITYYSSIMAL 120
  121 TLRFWLASFG SELPWSRCWE SWGTDCHDGN AQNSSGKMSP AQLREILHEV PNIDNGLSLP 180
  181 NWQLVACLAI AWLVIGGVLI RGIKSSGKAA YFLGVFPYVV LLILLLRAVT LPGAIDGIIY 240
  241 FFKPQWRELL NPLVWYAAVT QVFFSLAICF GTLITYASYN NFNRNVYNDI VIITTMDSCS 300
  301 SIIAGCITFG ILGNLARETG NPDIGSVVKG GAGLAFISYP EAIAKFEYVP QMFAVLFFLM 360
  361 LFVLGIGSTV GMGSCILRVI RDQFGLRSPP IWKLASGLTV LGFSVSIVYM TPGGQFILNL 420
  421 VDFYGVSFTA LILAIGELVA VAWIYGVNRF CEDIKFMMGI ETGWYWRLCW RFITPGLMTA 480
  481 VLIYMLLDMS ALEYKGVGYP TLAHVFGCFL ATLGLIQLPG WAIYAIYKKR GHNGSFWQRI 540
  541 RAACKPSDTW GPANVQLDAT I

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 64.045757
Match: 2a65A
Description: Crystal structure of LEUTAA, a bacterial homolog of Na+/Cl--dependent neurotransmitter transporters
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle