YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CG12263-PA
Organism: Drosophila melanogaster
Length: 1077 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG12263-PA.

Description E-value Query
Range
Subject
Range
gi|33589272 - gi|33589272|gb|AAQ22403.1| SD07983p [Drosophila melanogaster]
663.0 [0..1] [1077..1]

Back

Predicted Domain #1
Region A:
Residues: [1-446]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLTYLFVLI WLAFLISSGV MLFSRGFLLA RVSKTETSTC RRLSTNPNAE YVLTDEVVNE  60
   61 IFKDVNASSN LCLPQKSKVI VLVVDALKYE FGLYRANATD PLPYENKLVV LQELLQQNPD 120
  121 HARLMRFRAD PPTTTLQRLK GLTTGSLPTF IDIGSNFASP EINEDNIIDQ IVKNDLPVVF 180
  181 LGDSTWTDLY PHRFKRSYSY PSFDIFDLDS VDNEILKHLP KELESKDWQV LVAHFLGVDH 240
  241 CGHKHGPMHE EMARKLGEMN EVIRSVVAAM DNDTTLLVMG DHGMTASGDH GGDTDDETNA 300
  301 LLFAYSKQHR FYGNDSGSDS EMLQQIDLVP TLATILGVPI PYSNLGLVNF NIVPDLRVPH 360
  361 LNKFQTLLLH SWQNAQQIYR YFFQYALENK RTFNVEQMDH LETEFILLTH RVQTVYNEVA 420
  421 FKSFVRDLNT NLRDILGTCR EIWVRF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 30.522879
Match: 2qzuA
Description: No description for 2qzuA was found.

Predicted Domain #2
Region A:
Residues: [447-643]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DPTQMSQGLL FTFLPLFFIF LVVNNSRPAD FPHIFKAKEV FYVYLINLAA GVFGYRYFKT  60
   61 FSFKTEEQGV IFFTAISSAV ILAFHTLRHW TSIATNWSAV KRFGHMPTRL LLFGSMAVFF 120
  121 SNSFVIQEAK ILSYLLAAAI LLLSHELLRL SARLDFRTKF KASQFLRSTA LRLILASVLA 180
  181 ICLIRFAYTL FRCREEQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [644-760]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GNCSDFVNTG GAGFSLKKPG TGKTYILAVV VLVVYTTLTR LYLRSCGNLT GNLPNVLLAR  60
   61 YGPTVASICA GGHILLANSS IKHIQRTHID AMALVIYGLL LVQIIVLSWA PLMTFVL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [761-886]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PPRSSHTVTI NGNESIVPEI FRKMKRMYEG DDDERRSHIP VVYGLATVYS SIVIAFGVFL  60
   61 ALVMIVLLEP RASIGLVVCV AVGAILLSVH SILRYRTATS FESCVQPTFT ALVGWFLLAH 120
  121 FCFFAT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [887-1077]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SHQTTLSQIE WRAAFVGRTT GIGQSNLVSG ALVILNTFCG PIFFFCMYSL LSTETFSLFA  60
   61 LFPNLIRSCR SGGKVDASTS MSDLANEAVG FDMTRGELSL YEYEDVFLGT GFKLATQFFM 120
  121 LQGLKIFCAM LACTIHCRHL MVWKIFAPRF IYEALATFVS LPALIVGYLL VLRIHRGVDT 180
  181 LIKRINKAKV H

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle