YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: fj-PA
Organism: Drosophila melanogaster
Length: 583 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for fj-PA.

Description E-value Query
Range
Subject
Range
gi|1174260 - gi|1174260|gb|AAB01809.1| FJ
737.0 [0..1] [583..1]

Back

Predicted Domain #1
Region A:
Residues: [1-215]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYDIKRLEAG QQKLQQAQQP LGLDLSGQQQ QLTCSVITAP EHRANPNPSS ISQSNPSEAT  60
   61 HMTLLTLRRR RSLQRRACLL SILAAFVFGM ALGVVVPMFG LPRHQDSPPD LPEEQIQMVA 120
  121 VEPLSSYRVE FIKETDELSA EQVFRNAFHL EQDKDAPDSM VVKKLDTNDG SIKEFHVQRT 180
  181 ASGRYRKGPE RRLSKKMPER VQPQETSRSP TTSPT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [216-322]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NPTSEHQAGF IEEDVYWGPT VEQALPKGFA AKDQVSWERF VGEQGRVVRL EQGCGRMQNR  60
   61 MVVFADGTRA CARYRQNTDQ IQGEIFSYYL GQLLNISNLA PSAATVV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [323-493]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DTSTPNWAAA LGDITQAQWK ERRPVVLTRW LSDLEPAGIP QPFQPLERHL NKHDVWNLTR  60
   61 HMQSERQAQS QPHGLLKRLG AASSPGSAHQ SNAIEETGTG TETANGALVQ RLIELAQWSD 120
  121 LIVFDYLIAN LDRVVNNLYN FQWNADIMAA PAHNLARQSA SQLLVFLDNE S

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [494-583]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GLLHGYRLLK KYEAYHSLLL DNLCVFRRPT IDALRRLRAA GAGRRLRDLF ERTTSAGVRD  60
   61 VLPSLPDKSV KILVERIDRV LGQVQKCQGS 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle