YRC Public Data Repository - Protein Structure Prediction

Protein:	FBpp0289711, lol...
Organism:	Drosophila melanogaster
Length:	127 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0289711, lol....

Description	E-value	Query Range	Subject Range
gi\|91077018 - gi\|91077018\|ref\|XP_966622.1\| PREDICTED: similar to CG9924-PC, isoform C [Tribolium castaneum]	124.0	[0..10]	[125..252]
gi\|55242587, gi\|... - gi\|58382143\|ref\|XP_311713.2\| ENSANGP00000024127 [Anopheles gambiae str. PEST], gi\|55242587\|gb\|EAA449...	123.0	[0..9]	[125..205]
gi\|111308087, gi... - gi\|169642150\|gb\|AAI60560.1\| DRE1 protein [Xenopus tropicalis], gi\|118403467\|ref\|NP_001072337.1\| DRE1...	123.0	[0..6]	[126..38]
KLHDB_DROYA - Kelch-like protein diablo OS=Drosophila yakuba GN=dbo PE=3 SV=1 KLHDB_DROSE - Kelch-like protein diablo OS=Drosophila sechellia GN=dbo PE=3 SV=1 dbo-PA - The gene diablo is referred to in FlyBase by the symbol Dmel\dbo (CG6224, FBgn0040230). It is a prot...	123.0	[0..3]	[125..42]
gi\|108878796, gi... - gi\|157110262\|ref\|XP_001651027.1\| speckle-type poz protein [Aedes aegypti], gi\|108878796\|gb\|EAT43021....	122.0	[0..9]	[125..268]
gi\|50746178 - gi\|50746178\|ref\|XP_420390.1\| PREDICTED: similar to Kelch-like 2, Mayven [Gallus gallus]	122.0	[0..15]	[125..252]
CE18133 - status:Confirmed UniProt:O61795 protein_id:AAC17022.1	122.0	[0..2]	[125..25]

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Predicted Domain #1

Region A:
Residues: [1-127]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMSSDQQFFL KWNDFQTNMV TSFRHLRDEK SFTDVTLACE GQTCKAHKMV LSACSPYFKA  60
   61 LLEENPSKHP IIILKDVSYI HLQAILEFMY AGEVNVSQEQ LPAFLKTADR LKVKGLAETP 120
  121 SSIKREG

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	25.0
Match:	2nn2A
Description:	No description for 2nn2A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits