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View Structure Prediction Details

Protein: CG5756-PB
Organism: Drosophila melanogaster
Length: 742 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG5756-PB.

Description E-value Query
Range
Subject
Range
CG5756-PA - This gene is referred to in FlyBase by the symbol Dmel\CG5756 (CG5756, FBgn0034301). It is a protein...
260.0 [0..1] [529..1]

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Predicted Domain #1
Region A:
Residues: [1-137]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWPPSSCLWL ALALLVGVAQ AQSGSREHFE DADKSSEYTD QQFDLRHTIP GEPGLDYPIL  60
   61 SSPPRTSFVC KGRHEGYYAD VESRCQAFRI CAHTARSPQG FGFLCPNGTL FSQKNFVCDW 120
  121 YRNVNCDDSE KYYEMNE

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.46
Match: 1dqcA
Description: Tachycitin
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [138-358]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EKTVGSTHEM MERVRHMMEY PMKTISKALQ QTQSQSQNPH HSLSKDLSGA SGVLSQPAAI  60
   61 KLNDPETQVV GRGEDVKSEP LSAVQLGSIN PGDSEDEGIY VNSLGELSSD PGIQFDHTNA 120
  121 HIVAEYPREY HYQKQKNFAE RVNAGLDILT DSESNSGEAM APDYIKHIRN TKDEAVQLDL 180
  181 VSNINNLLDE VSTDVDPSIS GYQSMAPPKV KQPFRFLSRG F

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [359-634]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SMQRENGKGS SSSGYGYIKP KQTPSTVRFT NFKSAQSQGS NQAQQNQRQQ QQQHQVAKQQ  60
   61 HHSVSSSYVK PAAAPAISSL TVPQRPQQTS QSSVPPGIVI ARAEGQRIAP NSASSIISSL 120
  121 ATQAPVTSNQ GNSYVSLNDF LNNKFGQSPA ASSNVHSAAT LQQEQQPHYQ QQATLSLQQQ 180
  181 QQQQRQPVLQ QQHQLVQQQR QPVQQQLSFI SQQYQQPQQQ SIYQQYKQPQ QQQQQQHFQQ 240
  241 QQQRTTIHTN QQPYLTPNIF VPYHQQQQQL PQFPPL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [635-742]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 APPVSISTGN IAQGPVIAGR HVDHLNVQLP TLPNGLIPGL QLAQKRSDVS SSQLQLTDTK  60
   61 GKNNFSGSGK SRERAFYAGR TSYDVPQSSV GRLPNDITQQ LRRRLRRF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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