| Protein: | CG5002-PA |
| Organism: | Drosophila melanogaster |
| Length: | 595 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG5002-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
351.0 | [0..5] | [578..46] |
|
Region A: Residues: [1-143] |
1 11 21 31 41 51
| | | | | |
1 MRADEDNLYR EQLPNVSTLI RDGGRKLCRP STVTNKFPIL KWLPRYRLEY IMQDFIAGFT 60
61 VGLTTIPQAI AYGVVAGLEP QYGLYSAFMG CFTYIVFGSC KDVTIATTAI MALMVNQYAT 120
121 ISPDYAVLVC FLAGCIVLLL GLL
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [144-255] |
1 11 21 31 41 51
| | | | | |
1 NMGVLVRFIS IPVITGFTMA AATTIGSAQI NNIVGLTSPS NDLLPAWKNF FTHLTSIRLW 60
61 DALLGVSSLV FLLLMTRVKD IKWGNRIFWK YLGLSRNALA VIFGTFLAYI LS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [256-459] |
1 11 21 31 41 51
| | | | | |
1 RDGNQPFRVT GNITAGVPPF RLPPFSTTVD GEYVSFGEMI STVGASLGSI PLISILEIVA 60
61 ISKAFSKGKI VDASQEMVAL GMCNIMGSFV LSMPVTGSFT RTAVNNASGV KTPLGGAVTG 120
121 ALVLMALAFL TQTFYFIPKC TLAAIIIAAM ISLVELHKIK DMWKSKKKDL FPFVVTVLTC 180
181 MFWSLEYGIL CGIGANMVYI LYSS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [460-595] |
1 11 21 31 41 51
| | | | | |
1 ARPHVDIKLE KINGHEVSVV DVKQKLDYAS AEYLKEKVVR FLNNQNGETQ LVVIKGEEIN 60
61 SIDYTVAMNI VSMKGDLEAL NCAMICWNWN IASAGVVCRL NNDLRPIFKF DLSLEEVVAG 120
121 HFDSPSNTAS TVTIEA
|
| Detection Method: | |
| Confidence: | 9.09691 |
| Match: | 1sboA |
| Description: | Solution Structure of putative anti sigma factor antagonist from Thermotoga maritima (TM1442) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.97991551312897 | bayes_pls_golite062009 |
| protein binding | 1.39062728142841 | bayes_pls_golite062009 |
