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View Structure Prediction Details

Protein: CG6796-PA
Organism: Drosophila melanogaster
Length: 460 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG6796-PA.

Description E-value Query
Range
Subject
Range
SYN_CLOTE - Asparagine--tRNA ligase OS=Clostridium tetani (strain Massachusetts / E88) GN=asnS PE=3 SV=1
SYN_CLOTE - Asparagine--tRNA ligase OS=Clostridium tetani GN=asnS PE=3 SV=1
443.0 [0..9] [459..1]

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Predicted Domain #1
Region A:
Residues: [1-460]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFLRRFYSK SGRIAQILKT NKPGDSLAIQ GWIKNVRRLK NNTFLDINDG STSSRFQVVV  60
   61 PRTPENQHLA PGSVIAAVGK IQVAPNGSFE LHANQVEMLA EGRLQEGYPF SPKQKHPPEY 120
  121 VREHLHLRSR VDFVAAQMRV RHKAQKAIHD YMDDQDFVQI NTPLLTTNDC EGAGEVFRVQ 180
  181 PDSQDLLKQM NRPNIPMEQS YFDSKVFLSV SGQLHLEAMT YGLGKTYTLS PAFRAENSKS 240
  241 PLHLAEFYMF EAELAHLEEM EKLAQFIEQM LKSVTNRLLE TSGEDLSFCQ RNSNSNSDLP 300
  301 WLQVPWKIMS YDEALQVLQE NKDSLKTPIS LNEGFSKDQE LFLVAHCGAP VFVVDWPAQQ 360
  361 KPFYMKVSRS NPNRVHALDL LMPAVGELCG GSLRESDPAI LKSHPHLPKD LEWYVDLRKY 420
  421 GGVPTGGFGM GFERYLQLVT GVKNIRDVIP FPRYPHSCKM 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 107.0
Match: 1b8aA
Description: Aspartyl-tRNA synthetase (AspRS)
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
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