YRC Public Data Repository - Protein Structure Prediction

Protein:	CG6421-PA
Organism:	Drosophila melanogaster
Length:	161 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG6421-PA.

Description	E-value	Query Range	Subject Range
gi\|3929696, gi\|7... - pir\|\|T13688 destabilase 2 homolog - fruit fly (Drosophila melanogaster), gi\|3929696\|emb\|CAA21317.1\|...	212.0	[0..1]	[161..1]
gi\|54635953, gi\|... - gi\|54635953\|gb\|EAL25356.1\| GA19580-PA [Drosophila pseudoobscura], gi\|125808531\|ref\|XP_001360781.1\| G...	203.0	[0..7]	[161..1]
gi\|116131741, gi... - gi\|119113335\|ref\|XP_309527.3\| AGAP011119-PA [Anopheles gambiae str. PEST], gi\|116131741\|gb\|EAA05103.... gi\|49089585 - gi\|49089585\|gb\|AAT51799.1\| lysozyme i-1 [Anopheles gambiae]	180.0	[0..5]	[158..2]
ilys-5 - status:Confirmed UniProt:Q19698 protein_id:AAA83197.1	178.0	[0..12]	[151..6]
gi\|39595035, gi\|... - gi\|39595035\|emb\|CAE70903.1\| Hypothetical protein CBG17700 [Caenorhabditis briggsae], gi\|187025588\|em... gi\|157758113 - gi\|157758113\|ref\|XP_001671400.1\| Hypothetical protein CBG17700 [Caenorhabditis briggsae AF16]	174.0	[0..4]	[148..83]
gi\|23263578 - gi\|23263578\|gb\|AAN16209.1\| lysozyme [Bathymodiolus thermophilus]	173.0	[0..1]	[150..1]

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Predicted Domain #1

Region A:
Residues: [1-161]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVFLLYSIY LLLVLSPSLV QGQGHVLDKP VTELCLTCIC EAISGCNATA ICTSAEKGAC  60
   61 GIFRITWGYW VDAGKLTVNG EHPDSEKAFI NCAKDPHCAA DLVQNYMKKF NQDCNDDGEM 120
  121 DCHDYARIHK LGAYGCQADM PYNFQSVFEE CIERYEDEGF E

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	37.69897
Match:	2dqaA
Description:	No description for 2dqaA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits