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View Structure Prediction Details

Protein: CG5550-PA
Organism: Drosophila melanogaster
Length: 246 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG5550-PA.

Description E-value Query
Range
Subject
Range
gi|50510321 - gi|50510321|dbj|BAD32146.1| mKIAA0003 protein [Mus musculus]
269.0 [0..1] [245..271]

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Predicted Domain #1
Region A:
Residues: [1-246]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPICFALCV FSLGLFYLAS AEIGENVKIQ TYKKYSSSCK ELNPKKSGVQ KIQVGSDVIE  60
   61 VYCDVTIAGK GWLVVQRRVS VEENFYRNWT SYQTGFGDLK GNFFIGLNNL NKISSLQPQE 120
  121 LYIELVDFAG EKRYAHYSVF HVGNVYSNYP ITQLGAYSGT AGDSLSYHLY QPFSTFDRDN 180
  181 DNATINCAAR YMGAWWYREC LSSNLNGAYL GGNHTDPALF GSGIVWGEWK GFTYSYKTVN 240
  241 IMVRPK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 64.30103
Match: 2j3fA
Description: No description for 2j3fA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle