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View Structure Prediction Details

Protein: CG4945-PB, CG4945-PC
Organism: Drosophila melanogaster
Length: 577 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG4945-PB, CG4945-PC.

Description E-value Query
Range
Subject
Range
gi|560653 - gi|560653|gb|AAB30671.1| Ca2+/calmodulin-dependent protein kinase II gamma-c; CaM kinase II gamma-c ...
319.0 [0..20] [509..8]

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Predicted Domain #1
Region A:
Residues: [1-369]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKKPRGNIH KIREFELEKI QLVDEFDIIQ IVGEGWFGKI LLVEHRGSQT EMVLKAVPKP  60
   61 YVTLRDFYRE FHYGLHLGVH RHIVTTYDVA FETAGFYVFT QEYAPLGDLT SNVTDSGVGE 120
  121 VYSKRVAKQL ASAIDYMHSK DIVHRDIKLD NVLIYRSDFQ RIKLCDFGES FPTGSTVERR 180
  181 NEWLPYSPPE VLEIKPEGSY KADPSHDVWQ FGIVIFVCLT GCLPWQKAAS DDPRYVRYLA 240
  241 WQGGLMMMPL RRTPRLFKLL TSNAQRMFKR FFARISNRPK SLADVTKFLD DRWLAKTAQK 300
  301 EMAEYETDEL CPSMYSFHSS PDEKNKLLYT LADCGIETNV DRQQKKNRIK DWIESSIITE 360
  361 EDEEENEET

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 70.0
Match: 2qnjA
Description: No description for 2qnjA was found.

Predicted Domain #2
Region A:
Residues: [370-577]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NSASPSSSVS REPLPGHISS LRKPTSPAES AKEINSTLKD ATQKHFDPRT GALQQGPSEM  60
   61 GQVAMAYSKS ASPASNYSTT ASTLNNADSL MTLGSRQDLL ASNLTMYTSM ETELNRLGEA 120
  121 DPRLNQRTQS NNPLLTTFDV NTNPAAKNSI GVGTRGSSRS ILKSSIATAA YPALGAFNHG 180
  181 QSHSLQQLNQ HLQTSTGLTP SKSSFFRR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle