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View Structure Prediction Details

Protein: Menl-1-PB
Organism: Drosophila melanogaster
Length: 581 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Menl-1-PB.

Description E-value Query
Range
Subject
Range
gi|46850200 - gi|46850200|gb|AAT02533.1| NADP-dependent malic enzyme 1 [Hydrilla verticillata]
758.0 [0..5] [576..78]

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Predicted Domain #1
Region A:
Residues: [1-581]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFFRLLNFG ITRGSSISKT HQSNCECSPN LIKIRPSSSH DTIRVPIEVV FSDKCNKALA  60
   61 FTLEERQRLC IHGLMPACVR TYDEQMLAIE SNFHSFESNV GRYRYLRALR QGYERLYFQF 120
  121 VSKNVHAVLP IIYTPTVGLA CTVYGMLYRG MTGIHITKHD RGHMKQILSN WPMRRSVKAI 180
  181 CVTDGQRILG LGDLGANGMG IAVGKMELYT ALAGIPPSML LPICLDVGTN NKSLHEDPLY 240
  241 IGLRDERLKG DEYVCFVDEF MEAVVSTFGD QTLIHFEDFA TPNAFMFLNR YQHCYCHFND 300
  301 DIQGTAAVGL GGLLGIQRIT KKPLEEHVIV FAGAGSAAMG IAYLLKMELM SRGLSEADAA 360
  361 KNIYFYDQDG VLTTARKSIP DILCVFAKNM KETKSLETLV EQVKPSIIMG ATSAPGLFTE 420
  421 KIIRTMAASH ERPGIFAFSN PTIKSECTAE QAYKFSDGKA IYSAGSPFPP VEFNGKRLTP 480
  481 GQANNCFAFP ALVLATMTVL ATRMPDEIFL LAAHELAEFP TNEEMQSGRI YPLVKQANEV 540
  541 AYKIGVKVAK YLIENGESLH LHICAYYYLS NWLIKVMLSA I

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 2aw5A
Description: Crystal structure of a human malic enzyme
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle