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View Structure Prediction Details

Protein: CG6262-PC
Organism: Drosophila melanogaster
Length: 466 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG6262-PC.

Description E-value Query
Range
Subject
Range
gi|33589644 - gi|33589644|gb|AAQ22588.1| AT28434p [Drosophila melanogaster]
391.0 [0..1] [466..577]

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Predicted Domain #1
Region A:
Residues: [1-324]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDDQPSKKRC VCGAPSMVGT MSHKSTATTA TSDFAQQTQP PCSCGIAQKQ RSQTQPGEDG  60
   61 KCSCGAGAKE KSQQQLQPKD APSCGICGSQ KQQPSQAQMQ RSQQKVDDDQ CTCSRKEALQ 120
  121 QSQSQQQRTL GIQHDPDCPC AGPQQKGAGL IVVQGQVPDT DPDCECSMDE RQKQQMEQQQ 180
  181 KQQDCMRQQQ QQQQEHQKQQ QQLQSEQQQD CTTKPQTQDC SQHLKKSNGG CGCQDDEDED 240
  241 RHDALTGHYF PVADKDPDDV YQQESKSTQR ESGCDGCGRD DCPDPPQEDC GCSPVAKPQQ 300
  301 TPIAECAPQP KAPQPAPADD CSCA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [325-466]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VGKSQSKAAS VVPPPTFICP HCGGVTSEAF LSTHTIGTNR TMGPQDDCGA AGQPLRGLAS  60
   61 KGIQSGHSKV VAGGAGAECA PCKAHVTADF PAGHGPKPLF NKQFPLADPA SNFDACPPKR 120
  121 GSDPTNNKKK KCCNCDEKED GE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle