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View Structure Prediction Details

Protein: csul-PB
Organism: Drosophila melanogaster
Length: 605 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for csul-PB.

Description E-value Query
Range
Subject
Range
gi|109082893 - gi|109082893|ref|XP_001103964.1| PREDICTED: similar to protein arginine methyltransferase 5 isoform ...
555.0 [0..12] [605..30]

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Predicted Domain #1
Region A:
Residues: [1-76]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNYYVCLHQE GVNSIPKLIE KAFANNYNVV STSINANMLP FEPHESDPTY PATILSGSDW  60
   61 NSKVIFTMSD VNVDSP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [77-246]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NDKLREHAKE VFMRDVAWAE HLQNVGNLMV RLRGPENENL ASIVLAKTKG NWFIQVPITN  60
   61 PELATFEHRK DATAEEVAEA ESNDPWNWWN NLRMVTKHST KVKVVIELND ADRPSKETVR 120
  121 RWLGEPIEAI IIPSSLFVRN RSNYCVLKKE WQLIVGHFIS VRANIIISTN 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [247-605]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PNDKALCQYA DYVNKLINDN CDKHMLNSYE NMLEIPLQPL CDNLDTYTYE VFETDPVKYK  60
   61 LYQDAVQAAL LDRVSAAEAK TKLTVVMLLG GGRGPLARAV FNAAELTKRK VRLYIIEKNP 120
  121 NAIRTLSNMV KTLWADKDVH IFSKDMRDFS PPELADIMVS ELLGSFGDNE LSPECLDGAL 180
  181 KLLKPDGISI PYKSTSYINP LMSAVLHQNV CQLLPTYPAF DYGYVSLLKN IYHIDEPQAL 240
  241 FEFVHPNRAE NIDNTRCKTV SFKVNKDCVL HGIGGYFDTH LYKDICLSIN PLTHTPGMFS 300
  301 WFPMFFATRP RTLREGQTIS IQFWRCVDAT KVWYEWQVVN SPDDWEHHNT RGTGYNMRL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 50.522879
Match: 1oriA
Description: Protein arginine N-methyltransferase 1, PRMT1
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle